RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ELMSAN1Q6PJG2 1045 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 ZC3H18Q86VM9 953 aaKnown RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 ASIC4Q96FT7 647 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 COL15A1P39059 1388 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 NFKBIAP25963 317 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 RBBP7Q16576 425 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 TTC8Q8TAM2 541 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 LZICQ8WZA0 190 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 FAM167AQ96KS9 214 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 EGFL8Q99944 293 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 KIAA1586Q9HCI6 787 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 KLHL11Q9NVR0 708 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 DONSONQ9NYP3 566 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 MROH7-TTC4A0A0A0MT08 1334 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 A8MXQ7 604 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 TRIM49P0CI25 452 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 TRIM49CP0CI26 452 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 NNMTP40261 264 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 LBRQ14739 615 aaKnown RBP11.66□□□□□ -0.54
VAPB-204ENST00000475243 ADA2Q9NZK5 511 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 ESYT3A0FGR9 886 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 TBCCQ15814 346 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 QRICH1Q2TAL8 776 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 HEATR6Q6AI08 1181 aaKnown RBP11.66□□□□□ -0.54
VAPB-204ENST00000475243 SLC9A2Q9UBY0 812 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 SCAF8Q9UPN6 1271 aaKnown RBP11.66□□□□□ -0.54
VAPB-204ENST00000475243 PROM2Q8N271 834 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 C1orf54Q8WWF1 131 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 NR1H4Q96RI1 486 aaPredicted RBP11.66□□□□□ -0.54
VAPB-204ENST00000475243 NARFQ9UHQ1 456 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 FBXL5Q9UKA1 691 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 TTC37Q6PGP7 1564 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 ATP8B1O43520 1251 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 SETSIPP0DME0 302 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 CPB1P15086 417 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 GGCXP38435 758 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 ACAD11Q709F0 780 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 RPAINQ86UA6 219 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 TRIML2Q8N7C3 387 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 RBM46Q8TBY0 533 aaKnown RBP11.66□□□□□ -0.54
VAPB-204ENST00000475243 CYP26B1Q9NR63 512 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 BARHL2Q9NY43 387 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 EMSYQ7Z589 1322 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 SDC4P31431 198 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 E2F4Q16254 413 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 NAALADL2Q58DX5 795 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 RNF168Q8IYW5 571 aaPredicted RBP11.66□□□□□ -0.54
VAPB-204ENST00000475243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.66□□□□□ -0.54
VAPB-204ENST00000475243 TRIM15Q9C019 465 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 FGFR1OP2Q9NVK5 253 aa11.66□□□□□ -0.54
VAPB-204ENST00000475243 ATP9BO43861 1147 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 PRAMEP78395 509 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 LRRC14Q15048 493 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 ACBD5Q5T8D3 534 aaPredicted RBP11.65□□□□□ -0.54
VAPB-204ENST00000475243 TAS2R42Q7RTR8 314 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 OSBPL9Q96SU4 736 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 ZCWPW1Q9H0M4 648 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 RGL1Q9NZL6 768 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 SYCE1LA8MT33 242 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 STRIP2Q9ULQ0 834 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 DCTN3O75935 186 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 P4HBP07237 508 aaKnown RBP11.65□□□□□ -0.54
VAPB-204ENST00000475243 SKIP12755 728 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 KCNA4P22459 653 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 FAM20AQ96MK3 541 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 GRIK1P39086 918 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 RGS9BPQ6ZS82 235 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 ADAM33Q9BZ11 813 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 KCNQ2O43526 872 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 CHRNA5P30532 468 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 KRT76Q01546 638 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 MORF4L2Q15014 288 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 OTULINQ96BN8 352 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 EPC1Q9H2F5 836 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 TRPC7Q9HCX4 862 aa11.65□□□□□ -0.54
VAPB-204ENST00000475243 BAZ2BQ9UIF8 2168 aaKnown RBP11.65□□□□□ -0.54
VAPB-204ENST00000475243 CCDC188H7C350 402 aa11.65□□□□□ -0.55
VAPB-204ENST00000475243 TEX33O43247 280 aa11.65□□□□□ -0.55
VAPB-204ENST00000475243 PMS2P54278 862 aa11.65□□□□□ -0.55
VAPB-204ENST00000475243 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.55
VAPB-204ENST00000475243 DDX47Q9H0S4 455 aaKnown RBP11.65□□□□□ -0.55
VAPB-204ENST00000475243 CYP4F11Q9HBI6 524 aa11.65□□□□□ -0.55
VAPB-204ENST00000475243 FBXO40Q9UH90 709 aa11.65□□□□□ -0.55
VAPB-204ENST00000475243 AGO2Q9UKV8 859 aaKnown RBP11.65□□□□□ -0.55
VAPB-204ENST00000475243 CFAP69A5D8W1 941 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 PNMA6AP0CW24 399 aaPredicted RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 COPB2P35606 906 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 ROR1Q01973 937 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 PDIA2Q13087 525 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 THEMIS2Q5TEJ8 643 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 APOBEC3FQ8IUX4 373 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 SH3KBP1Q96B97 665 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 AGAP3Q96P47 875 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 NEO1Q92859 1461 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 FOXN1O15353 648 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 TBXAS1P24557 533 aaPredicted RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 TTC13Q8NBP0 860 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 SLC7A5P2Q9GIP4 190 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms