RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 SEL1LQ9UBV2 794 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 YBX2Q9Y2T7 364 aaKnown RBP18.69■□□□□ 0.58
SCAF11-206ENST00000474828 INSL6Q9Y581 213 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 DENND3A2RUS2 1198 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 SFI1A8K8P3 1242 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 EDN1P05305 212 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 ARF4P18085 180 aaPredicted RBP18.68■□□□□ 0.58
SCAF11-206ENST00000474828 DNAJB2P25686 324 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 PBX2P40425 430 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 RAB27AP51159 221 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 MAPK6Q16659 721 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 ECHDC2Q86YB7 292 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 MYOCDQ8IZQ8 938 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 DEPTORQ8TB45 409 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 C7orf25Q9BPX7 421 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 TRIM9Q9C026 710 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 OLFML3Q9NRN5 406 aa18.68■□□□□ 0.58
SCAF11-206ENST00000474828 PIN4Q9Y237 131 aaKnown RBP18.68■□□□□ 0.58
SCAF11-206ENST00000474828 A0A1B0GVL5 298 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 ERLIN2O94905 339 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 LINC00271P0C7V0 271 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 STAG3L1P0CL83 205 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 SKIP12755 728 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 NDUFA8P51970 172 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 RAD51AP2Q09MP3 1159 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 DHX8Q14562 1220 aaKnown RBP18.67■□□□□ 0.58
SCAF11-206ENST00000474828 NOTUMQ6P988 496 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 TMCO2Q7Z6W1 182 aaPredicted RBP18.67■□□□□ 0.58
SCAF11-206ENST00000474828 SLC17A8Q8NDX2 589 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 ENGASEQ8NFI3 743 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 MRPS27Q92552 414 aaKnown RBP18.67■□□□□ 0.58
SCAF11-206ENST00000474828 DHX58Q96C10 678 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 KIFC3Q9BVG8 833 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 PTPRHQ9HD43 1115 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 KMT5AQ9NQR1 393 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 FAM105AQ9NUU6 356 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 RNF19AQ9NV58 838 aa18.67■□□□□ 0.58
SCAF11-206ENST00000474828 TTLL13PA6NNM8 815 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 H0YCG3 227 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 K7ERI5 159 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 INPPL1O15357 1258 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 B4GALT5O43286 388 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 TLL1O43897 1013 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 PPP1R37O75864 691 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 PRKCBP05771 671 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 GAP43P17677 238 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 ABCD1P33897 745 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 RABGGTBP53611 331 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 SMTNP53814 917 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 GTF2BQ00403 316 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 AMPD3Q01432 767 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 EHHADHQ08426 723 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 NT5DC1Q5TFE4 455 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 GOLPH3LQ9H4A5 285 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 MSRAQ9UJ68 235 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 GBF1Q92538 1859 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 ZMYM2Q9UBW7 1377 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 TRANK1O15050 2925 aa18.66■□□□□ 0.58
SCAF11-206ENST00000474828 CCDC169A6NNP5 214 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 ABLIM1O14639 778 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 TRAK2O60296 914 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 PIGRP01833 764 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 MYL1P05976 194 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 PROZP22891 400 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 CACNB1Q02641 598 aaPredicted RBP18.65■□□□□ 0.58
SCAF11-206ENST00000474828 NCBP1Q09161 790 aaKnown RBP18.65■□□□□ 0.58
SCAF11-206ENST00000474828 LONRF3Q496Y0 759 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 FMR1NBQ8N0W7 255 aaPredicted RBP18.65■□□□□ 0.58
SCAF11-206ENST00000474828 CNNM3Q8NE01 707 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 TIFAQ96CG3 184 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 PCDHB7Q9Y5E2 793 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 CDH23Q9H251 3354 aa18.65■□□□□ 0.58
SCAF11-206ENST00000474828 LCHNA4D1U4 455 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 SLC16A4O15374 487 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 TBCAO75347 108 aaKnown RBP18.64■□□□□ 0.57
SCAF11-206ENST00000474828 FAM13AO94988 1023 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 ARHGEF15O94989 841 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 MYOGP15173 224 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 SYKP43405 635 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 TAP1Q03518 808 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 PRPF4BQ13523 1007 aaKnown RBP18.64■□□□□ 0.57
SCAF11-206ENST00000474828 SNW1Q13573 536 aaKnown RBP18.64■□□□□ 0.57
SCAF11-206ENST00000474828 CSPP1Q1MSJ5 1256 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 TWF2Q6IBS0 349 aaKnown RBP18.64■□□□□ 0.57
SCAF11-206ENST00000474828 SLC27A1Q6PCB7 646 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 ZPBP2Q6X784 338 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 DYMQ7RTS9 669 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 ZNF720Q7Z2F6 126 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 HAUS6Q7Z4H7 955 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 CMTR2Q8IYT2 770 aaKnown RBP18.64■□□□□ 0.57
SCAF11-206ENST00000474828 MYCT1Q8N699 235 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 FSIP1Q8NA03 581 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 SMG8Q8ND04 991 aaKnown RBP18.64■□□□□ 0.57
SCAF11-206ENST00000474828 CLP1Q92989 425 aaKnown RBP18.64■□□□□ 0.57
SCAF11-206ENST00000474828 ACO2Q99798 780 aaKnown RBP18.64■□□□□ 0.57
SCAF11-206ENST00000474828 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 TTYH1Q9H313 450 aaPredicted RBP18.64■□□□□ 0.57
SCAF11-206ENST00000474828 PDZD7Q9H5P4 517 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 SERTAD1Q9UHV2 236 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 TNFSF13BQ9Y275 285 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms