RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 FOXQ1Q9C009 403 aa13.97□□□□□ -0.17
TRIM13-207ENST00000474805 ARHGEF3Q9NR81 526 aa13.97□□□□□ -0.17
TRIM13-207ENST00000474805 FAM217BQ9NTX9 383 aaPredicted RBP13.97□□□□□ -0.17
TRIM13-207ENST00000474805 PCDHB2Q9Y5E7 798 aa13.97□□□□□ -0.17
TRIM13-207ENST00000474805 TDRD15B5MCY1 1934 aaKnown RBP13.97□□□□□ -0.17
TRIM13-207ENST00000474805 GPR179Q6PRD1 2367 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 COL4A3Q01955 1670 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 MSH4O15457 936 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 POMCP01189 267 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 SOD2P04179 222 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 URODP06132 367 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 ADH1AP07327 375 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 LAMP2P13473 410 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 CDC27P30260 824 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 DNM2P50570 870 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 RAB27AP51159 221 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 NECTIN1Q15223 517 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 MAML2Q8IZL2 1156 aaPredicted RBP13.96□□□□□ -0.17
TRIM13-207ENST00000474805 GJA10Q969M2 543 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 RPS6KC1Q96S38 1066 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 CEP89Q96ST8 783 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 TMEM175Q9BSA9 504 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 INO80BQ9C086 356 aaPredicted RBP13.96□□□□□ -0.17
TRIM13-207ENST00000474805 PIDD1Q9HB75 910 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 SUCLA2Q9P2R7 463 aaPredicted RBP13.96□□□□□ -0.17
TRIM13-207ENST00000474805 STK39Q9UEW8 545 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 SEPT9Q9UHD8 586 aaPredicted RBP13.96□□□□□ -0.17
TRIM13-207ENST00000474805 PATJQ8NI35 1801 aa13.96□□□□□ -0.17
TRIM13-207ENST00000474805 ACACBO00763 2458 aa13.96□□□□□ -0.18
TRIM13-207ENST00000474805 IGKV6-21A0A0C4DH24 114 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 GOLGA8AA7E2F4 631 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 GOLGA8BA8MQT2 603 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 STBD1O95210 358 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 GLUD1P00367 558 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 CIITAP33076 1130 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 PFKFB3Q16875 520 aaPredicted RBP13.95□□□□□ -0.18
TRIM13-207ENST00000474805 KIAA0319Q5VV43 1072 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 CYP26C1Q6V0L0 522 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 ZNF410Q86VK4 478 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 PALB2Q86YC2 1186 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 REXO1Q8N1G1 1221 aaKnown RBP13.95□□□□□ -0.18
TRIM13-207ENST00000474805 PJA1Q8NG27 643 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 ZNF707Q96C28 371 aaPredicted RBP13.95□□□□□ -0.18
TRIM13-207ENST00000474805 NLRP4Q96MN2 994 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 RPP25Q9BUL9 199 aaKnown RBP13.95□□□□□ -0.18
TRIM13-207ENST00000474805 NIFKQ9BYG3 293 aaKnown RBP13.95□□□□□ -0.18
TRIM13-207ENST00000474805 RHOBTB2Q9BYZ6 727 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 ZMYND12Q9H0C1 365 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 UNC45AQ9H3U1 944 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 RSAD1Q9HA92 442 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 C6orf50Q9HD87 102 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 MARCH5Q9NX47 278 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 PRG3Q9Y2Y8 225 aaPredicted RBP13.95□□□□□ -0.18
TRIM13-207ENST00000474805 NUMBLQ9Y6R0 609 aa13.95□□□□□ -0.18
TRIM13-207ENST00000474805 ANHXE9PGG2 379 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 EDIL3O43854 480 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 GAS7O60861 476 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
TRIM13-207ENST00000474805 SFNP31947 248 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 ADD1P35611 737 aaKnown RBP13.94□□□□□ -0.18
TRIM13-207ENST00000474805 JAK3P52333 1124 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 HTR4Q13639 388 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 VARS2Q5ST30 1063 aaKnown RBP13.94□□□□□ -0.18
TRIM13-207ENST00000474805 ELMSAN1Q6PJG2 1045 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 GET4Q7L5D6 327 aaPredicted RBP13.94□□□□□ -0.18
TRIM13-207ENST00000474805 MRPL10Q7Z7H8 261 aaKnown RBP13.94□□□□□ -0.18
TRIM13-207ENST00000474805 CCDC136Q96JN2 1154 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 HERC2P3Q9BVR0 1158 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 NT5C3AQ9H0P0 336 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 SLC2A4RGQ9NR83 387 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.94□□□□□ -0.181e-8■■■■■ 29.9
TRIM13-207ENST00000474805 KANSL3Q9P2N6 904 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 NCDNQ9UBB6 729 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 DPP7Q9UHL4 492 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 SSX2IPQ9Y2D8 614 aa13.94□□□□□ -0.18
TRIM13-207ENST00000474805 KLF18A0A0U1RQI7 1052 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 ESYT2A0FGR8 921 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 DDX11L8A8MPP1 907 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 GAS2O43903 313 aaKnown RBP13.93□□□□□ -0.18
TRIM13-207ENST00000474805 OR1G1P47890 313 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 GLUD2P49448 558 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 ATXN1P54253 815 aaKnown RBP13.93□□□□□ -0.18
TRIM13-207ENST00000474805 STARD6P59095 220 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 GPC5P78333 572 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 EXOSC10Q01780 885 aaKnown RBP13.93□□□□□ -0.18
TRIM13-207ENST00000474805 SNW1Q13573 536 aaKnown RBP13.93□□□□□ -0.18
TRIM13-207ENST00000474805 XKR3Q5GH77 459 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 UBXN11Q5T124 520 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 MIER3Q7Z3K6 550 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 GLYCTKQ8IVS8 523 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 SLC5A5Q92911 643 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 RIT2Q99578 217 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 TEKT3Q9BXF9 490 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 IFT122Q9HBG6 1241 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 RXFP1Q9HBX9 757 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 AGPAT5Q9NUQ2 364 aa13.93□□□□□ -0.18
TRIM13-207ENST00000474805 NAP1L2Q9ULW6 460 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-207ENST00000474805 F8W810 466 aa13.92□□□□□ -0.18
TRIM13-207ENST00000474805 MAFO75444 373 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms