RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 MAPK8IP1Q9UQF2 711 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 ATP11BQ9Y2G3 1177 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 USP20Q9Y2K6 914 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 TRPV2Q9Y5S1 764 aa11.02□□□□□ -0.65
COL8A1-206ENST00000474648 CCDC85CA6NKD9 419 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 H0YCG3 227 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 K7ENM7 598 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 K7ERI5 159 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 EIF3DO15371 548 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL8A1-206ENST00000474648 TGFB1I1O43294 461 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 SCP2P22307 547 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 EIF4BP23588 611 aaKnown RBP11.01□□□□□ -0.65
COL8A1-206ENST00000474648 PHKA2P46019 1235 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 EFNA5P52803 228 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 ALCAMQ13740 583 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 SRGAP1Q7Z6B7 1085 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 MYOCDQ8IZQ8 938 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 TNS4Q8IZW8 715 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 CAGE1Q8TC20 777 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 OSMRQ99650 979 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 C2orf40Q9H1Z8 148 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 KCTD10Q9H3F6 313 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 SEMA6BQ9H3T3 888 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 ANO10Q9NW15 660 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 GINS2Q9Y248 185 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 NOC2LQ9Y3T9 749 aaKnown RBP11.01□□□□□ -0.65
COL8A1-206ENST00000474648 DNAH12Q6ZR08 3092 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 UMODL1Q5DID0 1318 aa11.01□□□□□ -0.65
COL8A1-206ENST00000474648 ARID2Q68CP9 1835 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 TRIM43BA6NCK2 446 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 ANKRD63C9JTQ0 380 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 ACKR2O00590 384 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 KIAA0355O15063 1070 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 PIGRP01833 764 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 CLTBP09497 229 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 CTSHP09668 335 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 CCDC192P0DO97 292 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 SELPP16109 830 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 FGFR4P22455 802 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 PMS1P54277 932 aaKnown RBP11□□□□□ -0.65
COL8A1-206ENST00000474648 BFSP2Q13515 415 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 LPIN1Q14693 890 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 STX1AQ16623 288 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 FAM187BQ17R55 369 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 KNOP1Q1ED39 458 aaKnown RBP11□□□□□ -0.65
COL8A1-206ENST00000474648 CT47A1Q5JQC4 288 aaPredicted RBP11□□□□□ -0.65
COL8A1-206ENST00000474648 FBXO47Q5MNV8 452 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 CENPPQ6IPU0 288 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 LRSAM1Q6UWE0 723 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 C11orf57Q6ZUT1 292 aaPredicted RBP11□□□□□ -0.65
COL8A1-206ENST00000474648 MAP4K3Q8IVH8 894 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 ZBTB8OSQ8IWT0 167 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 NELFCDQ8IXH7 590 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 TRIM43Q96BQ3 446 aaPredicted RBP11□□□□□ -0.65
COL8A1-206ENST00000474648 HVCN1Q96D96 273 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 DHTKD1Q96HY7 919 aaPredicted RBP11□□□□□ -0.65
COL8A1-206ENST00000474648 ACCSQ96QU6 501 aa11□□□□□ -0.65
COL8A1-206ENST00000474648 AGO3Q9H9G7 860 aaKnown RBP11□□□□□ -0.65
COL8A1-206ENST00000474648 TRIP12Q14669 1992 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-206ENST00000474648 TISP43B9A030 160 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 INO80B-WBP1J3KQ70 363 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 B4GALT5O43286 388 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 PRKCBP05771 671 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 ITGB8P26012 769 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 ERCC5P28715 1186 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-206ENST00000474648 HOXA11P31270 313 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-206ENST00000474648 CYP2C18P33260 490 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 ABCD1P33897 745 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 MAPK6Q16659 721 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 ANO6Q4KMQ2 910 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 ZCWPW2Q504Y3 356 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 ANKRD40Q6AI12 368 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 SLC39A4Q6P5W5 647 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 STXBP4Q6ZWJ1 553 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 LRRC8DQ7L1W4 858 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 FAM228AQ86W67 206 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 NELFBQ8WX92 580 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 VWCEQ96DN2 955 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 SCLT1Q96NL6 688 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 ACO2Q99798 780 aaKnown RBP10.99□□□□□ -0.65
COL8A1-206ENST00000474648 TARS2Q9BW92 718 aaKnown RBP10.99□□□□□ -0.65
COL8A1-206ENST00000474648 INO80BQ9C086 356 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-206ENST00000474648 WNT8AQ9H1J5 351 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 DNAJC25Q9H1X3 360 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 HIPK3Q9H422 1215 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 TMEM206Q9H813 350 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 PTPRHQ9HD43 1115 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 TMEM39AQ9NV64 488 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 PRMT7Q9NVM4 692 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-206ENST00000474648 SQORQ9Y6N5 450 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 UBE4BO95155 1302 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 PHLPP2Q6ZVD8 1323 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 LOXHD1Q8IVV2 1947 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 ZMYM2Q9UBW7 1377 aa10.99□□□□□ -0.65
COL8A1-206ENST00000474648 M0QZ92 97 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 PDXKO00764 312 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 ABLIM1O14639 778 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 TSPAN1O60635 241 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 NBNO60934 754 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms