RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.81■□□□□ 0.28
VARS-223ENST00000474643 PRR33A8MZF0 331 aa16.81■□□□□ 0.28
VARS-223ENST00000474643 WNT7AO00755 349 aa16.81■□□□□ 0.28
VARS-223ENST00000474643 ATF7P17544 494 aaPredicted RBP16.81■□□□□ 0.28
VARS-223ENST00000474643 TRAPPC10P48553 1259 aa16.81■□□□□ 0.28
VARS-223ENST00000474643 ORC2Q13416 577 aaPredicted RBP16.81■□□□□ 0.28
VARS-223ENST00000474643 FERMT3Q86UX7 667 aa16.81■□□□□ 0.28
VARS-223ENST00000474643 HACE1Q8IYU2 909 aa16.81■□□□□ 0.28
VARS-223ENST00000474643 ZNF579Q8NAF0 562 aaKnown RBP16.81■□□□□ 0.28
VARS-223ENST00000474643 CASP10Q92851 521 aa16.81■□□□□ 0.28
VARS-223ENST00000474643 INTS4Q96HW7 963 aaKnown RBP16.81■□□□□ 0.28
VARS-223ENST00000474643 TRAIPQ9BWF2 469 aa16.81■□□□□ 0.28
VARS-223ENST00000474643 WRAP73Q9P2S5 460 aaPredicted RBP16.81■□□□□ 0.28
VARS-223ENST00000474643 MUTYHQ9UIF7 546 aa16.81■□□□□ 0.28
VARS-223ENST00000474643 C19orf67A6NJJ6 358 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 HIDE1A8MVS5 230 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 INO80B-WBP1J3KQ70 363 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 FSCN2O14926 492 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 DGAT1O75907 488 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 OR52Z1P0C646 297 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 TMEM132AQ24JP5 1023 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 CES5AQ6NT32 575 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 NOTUMQ6P988 496 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 ZBTB33Q86T24 672 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 RNF135Q8IUD6 432 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 VPS52Q8N1B4 723 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 ERMNQ8TAM6 284 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 APOL5Q9BWW9 433 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 RSAD1Q9HA92 442 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 IFT122Q9HBG6 1241 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 TBC1D13Q9NVG8 400 aa16.8■□□□□ 0.28
VARS-223ENST00000474643 CNTNAP2Q9UHC6 1331 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 SLITRK3O94933 977 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 CXCL14O95715 111 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 HOXB8P17481 243 aaPredicted RBP16.79■□□□□ 0.28
VARS-223ENST00000474643 PLA2G5P39877 138 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
VARS-223ENST00000474643 NBR1Q14596 966 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 CNNM3Q8NE01 707 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 PHF7Q9BWX1 381 aaPredicted RBP16.79■□□□□ 0.28
VARS-223ENST00000474643 TMEM60Q9H2L4 133 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 UBN1Q9NPG3 1134 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 TSHZ2Q9NRE2 1034 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 ANKEF1Q9NU02 776 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 KANSL3Q9P2N6 904 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 C5orf42Q9H799 3197 aa16.79■□□□□ 0.28
VARS-223ENST00000474643 ZBTB39O15060 712 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 USO1O60763 962 aaKnown RBP16.78■□□□□ 0.28
VARS-223ENST00000474643 ZNF623O75123 536 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 NR1I2O75469 434 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 ITGA4P13612 1032 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 SPIRE1Q08AE8 756 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 GIT2Q14161 759 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 BECN1Q14457 450 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 CBX2Q14781 532 aaPredicted RBP16.78■□□□□ 0.28
VARS-223ENST00000474643 PCBP1Q15365 356 aaKnown RBP eCLIP16.78■□□□□ 0.286e-7■■■■□ 21.8
VARS-223ENST00000474643 RILPL1Q5EBL4 403 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 ANKRD54Q6NXT1 300 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 MRPL43Q8N983 215 aaKnown RBP16.78■□□□□ 0.28
VARS-223ENST00000474643 PIGOQ8TEQ8 1089 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 STK39Q9UEW8 545 aa16.78■□□□□ 0.28
VARS-223ENST00000474643 POTEMA6NI47 508 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 LRRIQ4A6NIV6 560 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 OFD1O75665 1012 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 POMCP01189 267 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 SP100P23497 879 aaPredicted RBP16.77■□□□□ 0.28
VARS-223ENST00000474643 AXLP30530 894 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 MAEAQ7L5Y9 396 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 VN1R2Q8NFZ6 395 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 IGSF21Q96ID5 467 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 MTMR9Q96QG7 549 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 APOL6Q9BWW8 343 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 POLR3FQ9H1D9 316 aaPredicted RBP16.77■□□□□ 0.28
VARS-223ENST00000474643 NRDE2Q9H7Z3 1164 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 MINDY3Q9H8M7 445 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 C11orf16Q9NQ32 467 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 NR2E1Q9Y466 385 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 PCDHB6Q9Y5E3 794 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 HCFC2Q9Y5Z7 792 aa16.77■□□□□ 0.28
VARS-223ENST00000474643 C2orf71A6NGG8 1288 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 MEIS3P2A8K0S8 358 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 ALDH2P05091 517 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 SSBP05455 408 aaKnown RBP eCLIP16.76■□□□□ 0.27
VARS-223ENST00000474643 PTGDRQ13258 359 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 HERC4Q5GLZ8 1057 aaPredicted RBP16.76■□□□□ 0.27
VARS-223ENST00000474643 BRAPQ7Z569 592 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 ZBTB8OSQ8IWT0 167 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 SPRYD3Q8NCJ5 442 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 AUTS2Q8WXX7 1259 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 CPB2Q96IY4 423 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 RIPOR3Q96MK2 946 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 EMILIN2Q9BXX0 1053 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 RAB34Q9BZG1 259 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 DZANK1Q9NVP4 752 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 DNAJB4Q9UDY4 337 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 FAN1Q9Y2M0 1017 aa16.76■□□□□ 0.27
VARS-223ENST00000474643 TSPAN1O60635 241 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms