RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ANKRD54Q6NXT1 300 aa22.65■■□□□ 1.22
PDLIM4-206ENST00000474421 IFNLR1Q8IU57 520 aaPredicted RBP22.65■■□□□ 1.22
PDLIM4-206ENST00000474421 SUSD6Q92537 303 aa22.65■■□□□ 1.22
PDLIM4-206ENST00000474421 CASP10Q92851 521 aa22.65■■□□□ 1.22
PDLIM4-206ENST00000474421 IGSF21Q96ID5 467 aa22.65■■□□□ 1.22
PDLIM4-206ENST00000474421 PHF7Q9BWX1 381 aaPredicted RBP22.65■■□□□ 1.22
PDLIM4-206ENST00000474421 FOXP1Q9H334 677 aaPredicted RBP22.65■■□□□ 1.22
PDLIM4-206ENST00000474421 NRDE2Q9H7Z3 1164 aa22.65■■□□□ 1.22
PDLIM4-206ENST00000474421 RSAD1Q9HA92 442 aa22.65■■□□□ 1.22
PDLIM4-206ENST00000474421 C2orf71A6NGG8 1288 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 MEIS3P2A8K0S8 358 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 NT5C1B-RDH14C9J2C7 533 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 WNT7AO00755 349 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 GALTP07902 379 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 NCLP19338 710 aaKnown RBP22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 ATP2B1P20020 1258 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 RBM10P98175 930 aaKnown RBP22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 GUCY1B3Q02153 619 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 HERC4Q5GLZ8 1057 aaPredicted RBP22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 NOTUMQ6P988 496 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 AGMOQ6ZNB7 445 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 DDX53Q86TM3 631 aaKnown RBP22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 RNF135Q8IUD6 432 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 VPS52Q8N1B4 723 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 TMEM87AQ8NBN3 555 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 FAM193BQ96PV7 902 aaPredicted RBP22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 NFKBIZQ9BYH8 718 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 TUFT1Q9NNX1 390 aa22.64■■□□□ 1.21
PDLIM4-206ENST00000474421 POTEMA6NI47 508 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 LOC730098B7Z3J9 87 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 INO80B-WBP1J3KQ70 363 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 CXCL14O95715 111 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 ARL2P36404 184 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 RBM25P49756 843 aaKnown RBP22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 TPRNQ4KMQ1 711 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 UBXN11Q5T124 520 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 LLGL2Q6P1M3 1020 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 FAM184AQ8NB25 1140 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 ERMNQ8TAM6 284 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 TMEM60Q9H2L4 133 aa22.63■■□□□ 1.21
PDLIM4-206ENST00000474421 TSPAN1O60635 241 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 CA8P35219 290 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 GNL2Q13823 731 aaKnown RBP22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 CBX2Q14781 532 aaPredicted RBP22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 HACE1Q8IYU2 909 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 FBXO18Q8NFZ0 1043 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 PIGOQ8TEQ8 1089 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 FAM122AQ96E09 287 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 TMEM175Q9BSA9 504 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 POLR3CQ9BUI4 534 aaPredicted RBP22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 GBP3Q9H0R5 595 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 ZBP1Q9H171 429 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 S1PR5Q9H228 398 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 MUTYHQ9UIF7 546 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 IRAK3Q9Y616 596 aa22.62■■□□□ 1.21
PDLIM4-206ENST00000474421 CLASP2O75122 1294 aaKnown RBP22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 CTSAP10619 480 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 ITGA4P13612 1032 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 PLA2G5P39877 138 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 TRAPPC10P48553 1259 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 CAPSQ13938 189 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 SYCE2Q6PIF2 218 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 TMEM173Q86WV6 379 aaPredicted RBP22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 MCPH1Q8NEM0 835 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 ASAP3Q8TDY4 903 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 NACC1Q96RE7 527 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 DBR1Q9UK59 544 aaKnown RBP22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 HCFC2Q9Y5Z7 792 aa22.61■■□□□ 1.21
PDLIM4-206ENST00000474421 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 ALDH2P05091 517 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 OR52Z1P0C646 297 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 SPATA31C1P0DKV0 1188 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 GLRA2P23416 452 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 SLC11A1P49279 550 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 MBTD1Q05BQ5 628 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 ITIH3Q06033 890 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 CES5AQ6NT32 575 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 CATSPER3Q86XQ3 398 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 ZNF280BQ86YH2 543 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 TRIM6Q9C030 488 aaPredicted RBP22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 CSRNP2Q9H175 543 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 POLR3FQ9H1D9 316 aaPredicted RBP22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 DNAJB4Q9UDY4 337 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 NOL7Q9UMY1 257 aaKnown RBP22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 IPPQ9Y573 584 aa22.6■■□□□ 1.21
PDLIM4-206ENST00000474421 USO1O60763 962 aaKnown RBP22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 ZNF174Q15697 407 aa22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 TTC38Q5R3I4 469 aa22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 NOSTRINQ8IVI9 506 aa22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 SMG8Q8ND04 991 aaKnown RBP22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 RPGRIP1Q96KN7 1286 aa22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 NECTIN4Q96NY8 510 aa22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 DZANK1Q9NVP4 752 aa22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 FAN1Q9Y2M0 1017 aa22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 TRIOO75962 3097 aa22.59■■□□□ 1.21
PDLIM4-206ENST00000474421 INPPL1O15357 1258 aa22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 POMCP01189 267 aa22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 MUTP22033 750 aa22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 RPA1P27694 616 aa22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 HAUS3Q68CZ6 603 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms