RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 USP6NLQ92738 828 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 DEFB118Q96PH6 123 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.26□□□□□ -1.09
VPS50-211ENST00000474412 CCSER2Q9H7U1 834 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 VCPKMTQ9H867 229 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 INCENPQ9NQS7 918 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 C19orf73Q9NVV2 129 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 TMX2Q9Y320 296 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 CEP290O15078 2479 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 IGKV6D-41A0A0C4DH26 115 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 GJB1P08034 283 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 ZFYP08048 801 aaPredicted RBP8.25□□□□□ -1.09
VPS50-211ENST00000474412 CCND3P30281 292 aaPredicted RBP8.25□□□□□ -1.09
VPS50-211ENST00000474412 UBXN2AP68543 259 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 SBK1Q52WX2 424 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 FAM83BQ5T0W9 1011 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 LBX2Q6XYB7 198 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 TMC3Q7Z5M5 1100 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 IFNL3Q8IZI9 196 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 NPLOC4Q8TAT6 608 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 ENOX1Q8TC92 643 aaKnown RBP8.25□□□□□ -1.09
VPS50-211ENST00000474412 SYTL5Q8TDW5 730 aaPredicted RBP8.25□□□□□ -1.09
VPS50-211ENST00000474412 CHMP4CQ96CF2 233 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 GCC1Q96CN9 775 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 KIRREL1Q96J84 757 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 DHRS1Q96LJ7 313 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 TM9SF2Q99805 663 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 TGIF2Q9GZN2 237 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 IL25Q9H293 177 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 STAP2Q9UGK3 403 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 MYH7BA7E2Y1 1941 aa8.25□□□□□ -1.09
VPS50-211ENST00000474412 WDR46O15213 610 aaKnown RBP8.24□□□□□ -1.09
VPS50-211ENST00000474412 FLOT1O75955 427 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 FARP2O94887 1054 aaPredicted RBP8.24□□□□□ -1.09
VPS50-211ENST00000474412 APPP05067 770 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 ACRP10323 421 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 ZKSCAN1P17029 563 aaPredicted RBP8.24□□□□□ -1.09
VPS50-211ENST00000474412 PPARAQ07869 468 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 SNW1Q13573 536 aaKnown RBP8.24□□□□□ -1.09
VPS50-211ENST00000474412 FAM47AQ5JRC9 791 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 PLEKHH3Q7Z736 793 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 AMOTL1Q8IY63 956 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 SOCS4Q8WXH5 440 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 CEP95Q96GE4 821 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 CCDC17Q96LX7 622 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 APBA2Q99767 749 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 MOV10L1Q9BXT6 1211 aaKnown RBP8.24□□□□□ -1.09
VPS50-211ENST00000474412 HDAC8Q9BY41 377 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 NAPBQ9H115 298 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 FBXL21Q9UKT6 434 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.24□□□□□ -1.09
VPS50-211ENST00000474412 RABGAP1Q9Y3P9 1069 aa8.24□□□□□ -1.09
VPS50-211ENST00000474412 NMT2O60551 498 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 SGPL1O95470 568 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 NDUFB10O96000 172 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 GUCY2CP25092 1073 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 MAPK4P31152 587 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 CACNB2Q08289 660 aaPredicted RBP8.23□□□□□ -1.09
VPS50-211ENST00000474412 GRB14Q14449 540 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 PLS1Q14651 629 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 TMEM132BQ14DG7 1078 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 MAP3K21Q5TCX8 1036 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 FYB2Q5VWT5 728 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 GIMAP6Q6P9H5 292 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 CHD1LQ86WJ1 897 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 LSRQ86X29 649 aaPredicted RBP8.23□□□□□ -1.09
VPS50-211ENST00000474412 TAB3Q8N5C8 712 aaPredicted RBP8.23□□□□□ -1.09
VPS50-211ENST00000474412 RBBP8NLQ8NC74 664 aaPredicted RBP8.23□□□□□ -1.09
VPS50-211ENST00000474412 TRPV1Q8NER1 839 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 REPS2Q8NFH8 660 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 RASGRP4Q8TDF6 673 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 PRDM14Q9GZV8 571 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 SPATC1LQ9H0A9 340 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 ADAMTS10Q9H324 1103 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 ACBD3Q9H3P7 528 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 SUCOQ9UBS9 1254 aaKnown RBP8.23□□□□□ -1.09
VPS50-211ENST00000474412 INPP5FQ9Y2H2 1132 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 PCDHB12Q9Y5F1 795 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
VPS50-211ENST00000474412 TANC1Q9C0D5 1861 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 PFASO15067 1338 aa8.23□□□□□ -1.09
VPS50-211ENST00000474412 SSU72P8A0A1W2PR75 194 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 PRAMEF1O95521 474 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 GSPT1P15170 499 aaKnown RBP8.22□□□□□ -1.09
VPS50-211ENST00000474412 GNAT2P19087 354 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 ADORA2AP29274 412 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 CYP2C19P33261 490 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 RGS2P41220 211 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 SOX9P48436 509 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 NASPP49321 788 aaPredicted RBP8.22□□□□□ -1.09
VPS50-211ENST00000474412 HAND2P61296 217 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 NUCB1Q02818 461 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 TMEM67Q5HYA8 995 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 TDRD10Q5VZ19 366 aaKnown RBP8.22□□□□□ -1.09
VPS50-211ENST00000474412 ANO1Q5XXA6 986 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 OGFOD2Q6N063 350 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 RUFY4Q6ZNE9 571 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 SKAP1Q86WV1 359 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 TBC1D10CQ8IV04 446 aa8.22□□□□□ -1.09
VPS50-211ENST00000474412 CCDC144CPQ8IYA2 1237 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms