RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 NAIF1Q69YI7 327 aaPredicted RBP5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 LRRC55Q6ZSA7 311 aa5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 C7orf31Q8N865 590 aa5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 BEND2Q8NDZ0 799 aa5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 OR5M3Q8NGP4 307 aa5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 OXSMQ9NWU1 459 aa5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 ANKFY1Q9P2R3 1169 aa5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 B4GALT6Q9UBX8 382 aa5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 EIF2B4Q9UI10 523 aaKnown RBP5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 HS3ST4Q9Y661 456 aa5.19□□□□□ -1.58
TMEM50B-208ENST00000474272 COL4A3Q01955 1670 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 CENPVL1A0A0U1RR11 272 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 CBX4O00257 560 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 CDC45O75419 566 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 ALDH1A2O94788 518 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 LMO1P25800 156 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 APOBEC3AP31941 199 aaPredicted RBP5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 TKFCQ3LXA3 575 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 HECTD2Q5U5R9 776 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 EGFLAMQ63HQ2 1017 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 TIGD7Q6NT04 549 aaPredicted RBP5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 APBB1IPQ7Z5R6 666 aaPredicted RBP5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 NME9Q86XW9 330 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 XYLT1Q86Y38 959 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 HOMER1Q86YM7 354 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 PHYKPLQ8IUZ5 450 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 NTN5Q8WTR8 489 aaPredicted RBP5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 ENKD1Q9H0I2 346 aa5.18□□□□□ -1.58
TMEM50B-208ENST00000474272 ELL2O00472 640 aaPredicted RBP5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 RHOBTB3O94955 611 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 CCDC142Q17RM4 750 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 PLEKHG4Q58EX7 1191 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 DCAF17Q5H9S7 520 aaPredicted RBP5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 KIAA1841Q6NSI8 718 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 OLFML1Q6UWY5 402 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 APPBP2Q92624 585 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 LSM14BQ9BX40 385 aaKnown RBP5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 OSBPL6Q9BZF3 934 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 KCNH6Q9H252 994 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 ZMAT4Q9H898 229 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 SYNPO2LQ9H987 977 aa5.17□□□□□ -1.58
TMEM50B-208ENST00000474272 LCHNA4D1U4 455 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 KIAA0355O15063 1070 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 MTSS1O43312 755 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 B3GALT2O43825 422 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 DNAJC6O75061 913 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 RECQL4O94761 1208 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 FSBPO95073 299 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 ATP2A2P16615 1042 aaKnown RBP5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 LAG3P18627 525 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 HSD3B2P26439 372 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 MRPS21P82921 87 aaKnown RBP5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 ADCY1Q08828 1119 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 CFAP100Q494V2 611 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 FNDC3BQ53EP0 1204 aaKnown RBP5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 C16orf86Q6ZW13 317 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 UBE2R2Q712K3 238 aaPredicted RBP5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 KIAA0907Q7Z7F0 614 aaPredicted RBP5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 NXPE1Q8N323 547 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 LILRA3Q8N6C8 439 aaPredicted RBP5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 TEX101Q9BY14 249 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 INTS7Q9NVH2 962 aaKnown RBP5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 TRPM5Q9NZQ8 1165 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 PTGFRNQ9P2B2 879 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 USP18Q9UMW8 372 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 SPO11Q9Y5K1 396 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 MYPNQ86TC9 1320 aa5.16□□□□□ -1.58
TMEM50B-208ENST00000474272 ZAR1LA6NP61 321 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 MASP2O00187 686 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 LEFTY2O00292 366 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 ASMTLO95671 621 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 VPS72Q15906 364 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 MAN2A1Q16706 1144 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 C21orf62-AS1Q17RA5 79 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 MSL3Q8N5Y2 521 aaKnown RBP5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 OR52N2Q8NGI0 321 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 ZNF496Q96IT1 587 aaPredicted RBP5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 HIST1H2AHQ96KK5 128 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 HIST1H2AJQ99878 128 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 NDC1Q9BTX1 674 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 WDR11Q9BZH6 1224 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 CYP4F11Q9HBI6 524 aa5.15□□□□□ -1.59
TMEM50B-208ENST00000474272 TRIM24O15164 1050 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 NCR1O76036 304 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 NDUFA10O95299 355 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 LY86O95711 162 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 GYPEP15421 78 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 ZEB1P37275 1124 aaPredicted RBP5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 CLK3P49761 638 aaKnown RBP5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 CSRP2Q16527 193 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 Q6YL49 198 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 FAM83AQ86UY5 434 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 PPP1R14CQ8TAE6 165 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 ZNF764Q96H86 408 aaPredicted RBP5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 BBC3Q96PG8 261 aaPredicted RBP5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 FEZ1Q99689 392 aa5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 FDXACB1Q9BRP7 624 aaPredicted RBP5.14□□□□□ -1.59
TMEM50B-208ENST00000474272 MS4A5Q9H3V2 200 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms