RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 SIL1Q9H173 461 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 VCXQ9H320 206 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 CENPHQ9H3R5 247 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 BICC1Q9H694 974 aaKnown RBP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 FBRSQ9HAH7 460 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 ZBTB40Q9NUA8 1239 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 TBCCD1Q9NVR7 557 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 GALNT8Q9NY28 637 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 UBAP1Q9NZ09 502 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 CCNL1Q9UK58 526 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 ZNF652Q9Y2D9 606 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 FAM181BA6NEQ2 426 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 SLC22A31A6NKX4 558 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 BIN1O00499 593 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 FOXN1O15353 648 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 PRPF3O43395 683 aaKnown RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 SEC31AO94979 1220 aaKnown RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 LINGO3P0C6S8 592 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 MYCLP1P12525 358 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 IL2RBP14784 551 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 RAB6AP20340 208 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 CTCFP49711 727 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 RGS19P49795 217 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 SERPINB8P50452 374 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 PPIDQ08752 370 aaKnown RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 STIM1Q13586 685 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 MUM1Q2TAK8 710 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 C4orf46Q504U0 113 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 LACTB2Q53H82 288 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 TNNI3KQ59H18 835 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 PCGF5Q86SE9 256 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 ALYREFQ86V81 257 aaKnown RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 TTC30AQ86WT1 665 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 CCDC13Q8IYE1 715 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 SYCP3Q8IZU3 236 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 C1orf131Q8NDD1 294 aaKnown RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 SMARCC2Q8TAQ2 1214 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 BCAS4Q8TDM0 211 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 SYTL4Q96C24 671 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 HVCN1Q96D96 273 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 EPSTI1Q96J88 318 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 RPGRIP1Q96KN7 1286 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 CTAGE1Q96RT6 745 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 UBL7Q96S82 380 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 BPIFA3Q9BQP9 254 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 YIPF3Q9GZM5 350 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 DCTPP1Q9H773 170 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 AATFQ9NY61 560 aaKnown RBP eCLIP7.94□□□□□ -1.14
GPNMB-209ENST00000474157 TJP2Q9UDY2 1190 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 MAPK8IP1Q9UQF2 711 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 PRELID1Q9Y255 219 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 PCDHB2Q9Y5E7 798 aa7.94□□□□□ -1.14
GPNMB-209ENST00000474157 IQCA1LA6NCM1 817 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 TTC34A8MYJ7 566 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 CHURC1-FNTBB4DL54 471 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 GOLGA8KD6RF30 607 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 E7ENQ6 273 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 MYO1FO00160 1098 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 KLF4O43474 513 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 VAMP4O75379 141 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 CDC45O75419 566 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 TOP1P11387 765 aaKnown RBP7.93□□□□□ -1.14
GPNMB-209ENST00000474157 HOXD12P35452 270 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 CTAG1AP78358 180 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 CCZ1BP86790 482 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 CCZ1P86791 482 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-209ENST00000474157 COX10Q12887 443 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 LRMPQ12912 555 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 CASP8Q14790 479 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 SPCS2Q15005 226 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 NKG7Q16617 165 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 ARSHQ5FYA8 562 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 WDR93Q6P2C0 686 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 ZNF365Q70YC5 407 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 NLRP9Q7RTR0 991 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 NANOGNBQ7Z5D8 188 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 C11orf74Q86VG3 221 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 HID1Q8IV36 788 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 SMYD4Q8IYR2 804 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-209ENST00000474157 KCT2Q8NC54 265 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 KCNH5Q8NCM2 988 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 FAM13CQ8NE31 585 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 RUBCNQ92622 972 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 ATG4CQ96DT6 458 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 FAM46AQ96IP4 442 aaKnown RBP7.93□□□□□ -1.14
GPNMB-209ENST00000474157 TMEM87BQ96K49 555 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 SCYL1Q96KG9 808 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 TRIM55Q9BYV6 548 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 NACAP1Q9BZK3 213 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 PARVBQ9HBI1 364 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 SSU72Q9NP77 194 aaKnown RBP7.93□□□□□ -1.14
GPNMB-209ENST00000474157 ACTR10Q9NZ32 417 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 NRBP1Q9UHY1 535 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 ACAD8Q9UKU7 415 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 TPCN1Q9ULQ1 816 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 R3HDM2Q9Y2K5 976 aaKnown RBP7.93□□□□□ -1.14
GPNMB-209ENST00000474157 MYPNQ86TC9 1320 aa7.93□□□□□ -1.14
GPNMB-209ENST00000474157 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CFAP73A6NFT4 308 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CCDC85CA6NKD9 419 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms