RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PRKCEQ02156 737 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 GIT2Q14161 759 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 EFCAB12Q6NXP0 572 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 ZC3H14Q6PJT7 736 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 APOA5Q6Q788 366 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 DDX53Q86TM3 631 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 PPFIBP1Q86W92 1011 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF713Q8N859 430 aaPredicted RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 TMEM87AQ8NBN3 555 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 EXOC6Q8TAG9 804 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 RSPH1Q8WYR4 309 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 LPPQ93052 612 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 LENG9Q96B70 501 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 FAM167AQ96KS9 214 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF577Q9BSK1 485 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 TRAIPQ9BWF2 469 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 LSG1Q9H089 658 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 GLT8D2Q9H1C3 349 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 TBC1D22BQ9NU19 505 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 TBC1D13Q9NVG8 400 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 DACT1Q9NYF0 836 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 GABBR1Q9UBS5 961 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 FBXL21Q9UKT6 434 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 PCDHA10Q9Y5I2 948 aa5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 MAP1BP46821 2468 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-204ENST00000474025 MYH9P35579 1960 aaKnown RBP5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 C2orf16Q68DN1 1984 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 FREM2Q5SZK8 3169 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 KRBA1A5PL33 1030 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 MEIS3P2A8K0S8 358 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 WDR64B1ANS9 1081 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 MAP3K7O43318 606 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 LILRB3O75022 631 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 CNPP09543 421 aaKnown RBP5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 SLC11A1P49279 550 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 DRP2Q13474 957 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 TARBP2Q15633 366 aaKnown RBP5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 UGCGQ16739 394 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 RTN1Q16799 776 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 LETM2Q2VYF4 491 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 NOMO2Q5JPE7 1267 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 JAKMIP3Q5VZ66 844 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 CREB3L3Q68CJ9 461 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 GLB1LQ6UWU2 654 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 C15orf39Q6ZRI6 1047 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 KIAA2013Q8IYS2 634 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 CMASQ8NFW8 434 aaPredicted RBP5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 KCNG4Q8TDN1 519 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 NLRP7Q8WX94 980 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 SCLT1Q96NL6 688 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 NRDE2Q9H7Z3 1164 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 RBM28Q9NW13 759 aaKnown RBP5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 IGSF9Q9P2J2 1179 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 DNAJB4Q9UDY4 337 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 TCEAL9Q9UHQ7 104 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 R4GN57 208 aa5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 V9GY48 417 aaPredicted RBP5.79□□□□□ -1.48
SNRNP40-204ENST00000474025 LOC400499M0QZD8 3231 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 DOCK8Q8NF50 2099 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 CACNA1IQ9P0X4 2223 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 CACNA1GO43497 2377 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 ESYT2A0FGR8 921 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 ZBTB43O43298 467 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF623O75123 536 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 OFD1O75665 1012 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 KRT37O76014 449 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 PAPLNO95428 1278 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 CFHP08603 1231 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 SRFP11831 508 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 SFPQP23246 707 aaKnown RBP eCLIP5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 KLRC2P26717 231 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 CIITAP33076 1130 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 RNASELQ05823 741 aaKnown RBP5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 TBC1D8BQ0IIM8 1120 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 NECTIN1Q15223 517 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 TSR1Q2NL82 804 aaKnown RBP5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 LONRF3Q496Y0 759 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 PRR16Q569H4 304 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 KIAA0319Q5VV43 1072 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 TWF2Q6IBS0 349 aaKnown RBP5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 SYNE3Q6ZMZ3 975 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 PACS2Q86VP3 889 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF280BQ86YH2 543 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 REXO1Q8N1G1 1221 aaKnown RBP5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 RSAD2Q8WXG1 361 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 RIN2Q8WYP3 895 aaPredicted RBP5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 CNTNAP3BQ96NU0 1288 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 KLHL5Q96PQ7 755 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 MYADMQ96S97 322 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 CEP89Q96ST8 783 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 EMILIN2Q9BXX0 1053 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 RHOBTB2Q9BYZ6 727 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 CNTNAP3Q9BZ76 1288 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 GCOM2Q9BZD3 368 aaPredicted RBP5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 ZMYND12Q9H0C1 365 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 GBP3Q9H0R5 595 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 TBC1D17Q9HA65 648 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 WDR6Q9NNW5 1121 aaKnown RBP5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 MAN1C1Q9NR34 630 aa5.78□□□□□ -1.48
SNRNP40-204ENST00000474025 CHST12Q9NRB3 414 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms