RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TSPEARQ8WU66 669 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 GJA10Q969M2 543 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 STRBPQ96SI9 672 aaKnown RBP5.3□□□□□ -1.56
BRCA1-212ENST00000473961 SLC39A2Q9NP94 309 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 NLRC4Q9NPP4 1024 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 CHST12Q9NRB3 414 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 ARHGAP20Q9P2F6 1191 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 DDX20Q9UHI6 824 aaKnown RBP5.3□□□□□ -1.56
BRCA1-212ENST00000473961 TMPRSS11EQ9UL52 423 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 CAPN8A6NHC0 703 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 GOLIM4O00461 696 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 PHF2O75151 1096 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 TUSC2O75896 110 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 MPIG6BO95866 241 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 EFEMP2O95967 443 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 FOSP01100 380 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-212ENST00000473961 STAT5AP42229 794 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 GALK1P51570 392 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 USP14P54578 494 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 CCT2P78371 535 aaKnown RBP5.29□□□□□ -1.56
BRCA1-212ENST00000473961 IFIT5Q13325 482 aaKnown RBP5.29□□□□□ -1.56
BRCA1-212ENST00000473961 KIAA0753Q2KHM9 967 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 ANO6Q4KMQ2 910 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 UNQ6494/PRO21346Q6UXR6 183 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 TMC6Q7Z403 805 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 TTC7BQ86TV6 843 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 GLB1L3Q8NCI6 653 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-212ENST00000473961 MTFMTQ96DP5 389 aaKnown RBP5.29□□□□□ -1.56
BRCA1-212ENST00000473961 SLC39A13Q96H72 371 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 CLIC6Q96NY7 704 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 MYD88Q99836 296 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 C7orf25Q9BPX7 421 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 SELENOOQ9BVL4 669 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 AMNQ9BXJ7 453 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 RBM12Q9NTZ6 932 aaKnown RBP5.29□□□□□ -1.56
BRCA1-212ENST00000473961 KLHL11Q9NVR0 708 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 KLHL14Q9P2G3 628 aa5.29□□□□□ -1.56
BRCA1-212ENST00000473961 PUF60Q9UHX1 559 aaKnown RBP5.29□□□□□ -1.56
BRCA1-212ENST00000473961 CCDC154A6NI56 674 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 APAF1O14727 1248 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 PMM2O15305 246 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 B3GALT2O43825 422 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 UBXN7O94888 489 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 ENDOD1O94919 500 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 FSBPO95073 299 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 ARIH2O95376 493 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 PFKLP17858 780 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 MCAMP43121 646 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 ZNF280AP59817 542 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-212ENST00000473961 YBX1P67809 324 aaKnown RBP5.28□□□□□ -1.56
BRCA1-212ENST00000473961 BTKQ06187 659 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 CACNB2Q08289 660 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-212ENST00000473961 CR1LQ2VPA4 569 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 GRAMD1BQ3KR37 738 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 TMC5Q6UXY8 1006 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 MORC1Q86VD1 984 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 FAM186BQ8IYM0 893 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 DTX3Q8N9I9 347 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 FAM156AQ8NDB6 213 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 OR5AN1Q8NGI8 311 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 NRG4Q8WWG1 115 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 IL17RAQ96F46 866 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 CDK5RAP3Q96JB5 506 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 NUP62CLQ9H1M0 184 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 MANSC1Q9H8J5 431 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 POLR3BQ9NW08 1133 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-212ENST00000473961 SAE1Q9UBE0 346 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-212ENST00000473961 SERPINB13Q9UIV8 391 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 INTUQ9ULD6 942 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 PHTF1Q9UMS5 762 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 POLHQ9Y253 713 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 STXBP5LQ9Y2K9 1186 aa5.28□□□□□ -1.56
BRCA1-212ENST00000473961 HTRA2O43464 458 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-212ENST00000473961 TRIM13O60858 407 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 CHGBP05060 677 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 RPL17P18621 184 aaKnown RBP5.27□□□□□ -1.57
BRCA1-212ENST00000473961 SDHBP21912 280 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 HTR1BP28222 390 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 GPSM2P81274 684 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 ZNF200P98182 395 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-212ENST00000473961 MGAT2Q10469 447 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 DHX8Q14562 1220 aaKnown RBP5.27□□□□□ -1.57
BRCA1-212ENST00000473961 STILQ15468 1287 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 GRAMD4Q6IC98 578 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 OTOP2Q7RTS6 562 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 OVCH2Q7RTZ1 564 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 SLC41A1Q8IVJ1 513 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 DRC7Q8IY82 874 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 SPICE1Q8N0Z3 855 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 RGMAQ96B86 450 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 DYDC2Q96IM9 177 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 FAM167AQ96KS9 214 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 ARPC5LQ9BPX5 153 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 B3GNT5Q9BYG0 378 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 OSBPL6Q9BZF3 934 aa5.27□□□□□ -1.57
BRCA1-212ENST00000473961 EVLQ9UI08 416 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-212ENST00000473961 OVOL3O00110 214 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 FOXN3O00409 490 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 DAPK3O43293 454 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 SGTAO43765 313 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms