RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 COILP38432 576 aaPredicted RBP6.58□□□□□ -1.36
HERC4-209ENST00000473533 PTGIRP43119 386 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 IL9RQ01113 521 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 RNASELQ05823 741 aaKnown RBP6.58□□□□□ -1.36
HERC4-209ENST00000473533 ACVR2BQ13705 512 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 TNIP1Q15025 636 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 CNGA2Q16280 664 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 TNFAIP8L3Q5GJ75 292 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 RNF43Q68DV7 783 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 PAXIP1Q6ZW49 1069 aaPredicted RBP6.58□□□□□ -1.36
HERC4-209ENST00000473533 SPATA21Q7Z572 469 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 TXNRD3Q86VQ6 643 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 GPIHBP1Q8IV16 184 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 FBXO25Q8TCJ0 367 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 COA1Q9GZY4 146 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 JAG2Q9Y219 1238 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 SPATA31A5Q5VU36 1347 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 SPATA31A7Q8IWB4 1347 aa6.58□□□□□ -1.36
HERC4-209ENST00000473533 NRAPQ86VF7 1730 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 NPHP3-ACAD11A0A0J9YXS1 232 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 USP17L10C9JJH3 530 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 MPHOSPH10O00566 681 aaKnown RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 EXOC3O60645 756 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 CHRM1P11229 460 aaPredicted RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 FLT3P36888 993 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 SLC1A1P43005 524 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 CENPCQ03188 943 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 BFSP1Q12934 665 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 STAT4Q14765 748 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 SLC13A5Q86YT5 568 aaPredicted RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 C12orf56Q8IXR9 622 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 AGGF1Q8N302 714 aaeCLIP6.57□□□□□ -1.36
HERC4-209ENST00000473533 SH3TC2Q8TF17 1288 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 TCP11Q8WWU5 503 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 BORCS6Q96GS4 357 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 SNF8Q96H20 258 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 PRMT1Q99873 361 aaKnown RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 EIF2AK1Q9BQI3 630 aaKnown RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 SYT11Q9BT88 431 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 TUBB6Q9BUF5 446 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 TMX4Q9H1E5 349 aaPredicted RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 BHMT2Q9H2M3 363 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 LRRC19Q9H756 370 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 ECT2Q9H8V3 914 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 PPP1R9AQ9ULJ8 1098 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 USP20Q9Y2K6 914 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 ZNF536O15090 1300 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 EDIL3O43854 480 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 HIP1RO75146 1068 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 DCTN3O75935 186 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 MYBL1P10243 752 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 STX2P32856 288 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 RFC4P35249 363 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 MFAP3P55082 362 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 CACNB1Q02641 598 aaPredicted RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 ENPEPQ07075 957 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 SPIRE1Q08AE8 756 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 SLFN13Q68D06 897 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 TLDC1Q6P9B6 456 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 HHIPL2Q6UWX4 724 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 ZDHHC24Q6UX98 284 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 ARHGEF2Q92974 986 aaKnown RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 GJA10Q969M2 543 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 MAGEB18Q96M61 343 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 TTC25Q96NG3 672 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 DMAC2Q9NW81 257 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 LARSQ9P2J5 1176 aaKnown RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 GTF3C4Q9UKN8 822 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 EXOC7Q9UPT5 735 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 DAGLAQ9Y4D2 1042 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 PCDHA3Q9Y5H8 950 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 TAF1P21675 1872 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 WTIPA6NIX2 430 aaPredicted RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 PIK3CDO00329 1044 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 GNPATO15228 680 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 CDH16O75309 829 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 GJB6O95452 261 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 SPATA31C1P0DKV0 1188 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 ABCD1P33897 745 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 AUHQ13825 339 aaKnown RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 E2F5Q15329 346 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 RINT1Q6NUQ1 792 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 ENOSF1Q7L5Y1 443 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 LMNTD2Q8IXW0 634 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 CEP120Q8N960 986 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 CKAP2Q8WWK9 683 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 RNF25Q96BH1 459 aaPredicted RBP6.57□□□□□ -1.36
HERC4-209ENST00000473533 TRAIPQ9BWF2 469 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 FGFBP2Q9BYJ0 223 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 GRHL1Q9NZI5 618 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 LGALS13Q9UHV8 139 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 RPTORQ8N122 1335 aa6.57□□□□□ -1.36
HERC4-209ENST00000473533 ARFGEF1Q9Y6D6 1849 aa6.56□□□□□ -1.36
HERC4-209ENST00000473533 PPP1R12AO14974 1030 aaPredicted RBP6.56□□□□□ -1.36
HERC4-209ENST00000473533 CLIC2O15247 247 aa6.56□□□□□ -1.36
HERC4-209ENST00000473533 OAS1P00973 400 aaKnown RBP6.56□□□□□ -1.36
HERC4-209ENST00000473533 FTLP02792 175 aaPredicted RBP6.56□□□□□ -1.36
HERC4-209ENST00000473533 ATF2P15336 505 aa6.56□□□□□ -1.36
HERC4-209ENST00000473533 RPL21P46778 160 aaKnown RBP6.56□□□□□ -1.36
HERC4-209ENST00000473533 CASP5P51878 434 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms