RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ACKR2O00590 384 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 ENPP3O14638 875 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 MGEA5O60502 916 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 AMHP03971 560 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 PRKCBP05771 671 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 LIG1P18858 919 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 UNC13DQ70J99 1090 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 RTN4RL1Q86UN2 441 aaPredicted RBP20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 SFR1Q86XK3 245 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 ELOA2Q8IYF1 753 aaPredicted RBP20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 GRAMD1CQ8IYS0 662 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 PHOSPHO2Q8TCD6 241 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 CCDC51Q96ER9 411 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 ADAM2Q99965 735 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 RNF216Q9NWF9 866 aaPredicted RBP20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 CNTNAP2Q9UHC6 1331 aa20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 PIN4Q9Y237 131 aaKnown RBP20.91■□□□□ 0.94
CTDSP1-207ENST00000473420 K7ENM7 598 aa20.9■□□□□ 0.94
CTDSP1-207ENST00000473420 NR1I2O75469 434 aa20.9■□□□□ 0.94
CTDSP1-207ENST00000473420 HOXA11P31270 313 aaPredicted RBP20.9■□□□□ 0.94
CTDSP1-207ENST00000473420 COASYQ13057 564 aa20.9■□□□□ 0.94
CTDSP1-207ENST00000473420 CUL4BQ13620 913 aa20.9■□□□□ 0.94
CTDSP1-207ENST00000473420 HERC4Q5GLZ8 1057 aaPredicted RBP20.9■□□□□ 0.94
CTDSP1-207ENST00000473420 SLC24A5Q71RS6 500 aa20.9■□□□□ 0.94
CTDSP1-207ENST00000473420 HAUS6Q7Z4H7 955 aa20.9■□□□□ 0.94
CTDSP1-207ENST00000473420 BLZF1Q9H2G9 400 aa20.9■□□□□ 0.94
CTDSP1-207ENST00000473420 KINO60870 393 aaKnown RBP20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 ARF4P18085 180 aaPredicted RBP20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 SARSP49591 514 aaKnown RBP20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 GTF2BQ00403 316 aa20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 STRN3Q13033 797 aa20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 PRPF4BQ13523 1007 aaKnown RBP20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 ALCAMQ13740 583 aa20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 NOTUMQ6P988 496 aa20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 TAS1R3Q7RTX0 852 aa20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 HVCN1Q96D96 273 aa20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 LMBRD1Q9NUN5 540 aa20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 HOOK1Q9UJC3 728 aaKnown RBP20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 GBF1Q92538 1859 aa20.89■□□□□ 0.93
CTDSP1-207ENST00000473420 C9IYK1 514 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 RBAK-RBAKDNI3L0D1 243 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 SKIP12755 728 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 CASP1P29466 404 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 NMT1P30419 496 aaKnown RBP20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 RAB27AP51159 221 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 FAM189BP81408 668 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 DEFB103AP81534 67 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 EHHADHQ08426 723 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 POSTNQ15063 836 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 ZNF720Q7Z2F6 126 aa20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 ELAC1Q9H777 363 aaKnown RBP20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 MRPL44Q9H9J2 332 aaKnown RBP20.88■□□□□ 0.93
CTDSP1-207ENST00000473420 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 A0A0U1RQF3 1178 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 A0A1B0GUA9 196 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 N4BP3O15049 544 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 B4GALT5O43286 388 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 KLRC4O43908 158 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 PPP1R37O75864 691 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 EDN1P05305 212 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 ATP2A2P16615 1042 aaKnown RBP20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 DPYDQ12882 1025 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 TWF2Q6IBS0 349 aaKnown RBP20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 MYOCDQ8IZQ8 938 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 TOP1MTQ969P6 601 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 STRA6Q9BX79 667 aa20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 MRPL4Q9BYD3 311 aaKnown RBP20.87■□□□□ 0.93
CTDSP1-207ENST00000473420 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 PRR29P0C7W0 189 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 STAG3L1P0CL83 205 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 LRIT3Q3SXY7 679 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 SLC27A1Q6PCB7 646 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 STXBP4Q6ZWJ1 553 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 NPAS4Q8IUM7 802 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 MAP4K3Q8IVH8 894 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 CRIPAKQ8N1N5 446 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 CCDC47Q96A33 483 aaKnown RBP20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 CPB2Q96IY4 423 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 FAM105AQ9NUU6 356 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 TMEM161AQ9NX61 479 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 TBX20Q9UMR3 447 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 TNFSF13BQ9Y275 285 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 PCDHB13Q9Y5F0 798 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 COL4A6Q14031 1691 aa20.86■□□□□ 0.93
CTDSP1-207ENST00000473420 ZNF623O75123 536 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 PIGRP01833 764 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 RPN1P04843 607 aaKnown RBP20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 PSMD2Q13200 908 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 TMEM132AQ24JP5 1023 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 FAM26FQ5R3K3 315 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 UBXN11Q5T124 520 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 NT5DC1Q5TFE4 455 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 ZPBP2Q6X784 338 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 ECHDC2Q86YB7 292 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 HERC6Q8IVU3 1022 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 ACO2Q99798 780 aaKnown RBP20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 PDZD7Q9H5P4 517 aa20.85■□□□□ 0.93
CTDSP1-207ENST00000473420 EXOC1Q9NV70 894 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms