RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 PIN4Q9Y237 131 aaKnown RBP20.05■□□□□ 0.8
SNX4-204ENST00000473417 PI4K2BG5E9Z4 385 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 FSCN2O14926 492 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 GLP2RO95838 553 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 PPM1AP35813 382 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 NDUFV1P49821 464 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 ERVFC1P60507 584 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 SMAD4Q13485 552 aaKnown RBP20.04■□□□□ 0.8
SNX4-204ENST00000473417 EMC2Q15006 297 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 SMAD2Q15796 467 aaKnown RBP20.04■□□□□ 0.8
SNX4-204ENST00000473417 TMEM31Q5JXX7 168 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 TWF2Q6IBS0 349 aaKnown RBP20.04■□□□□ 0.8
SNX4-204ENST00000473417 PDE12Q6L8Q7 609 aaKnown RBP20.04■□□□□ 0.8
SNX4-204ENST00000473417 RSPH1Q8WYR4 309 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 MRPS27Q92552 414 aaKnown RBP20.04■□□□□ 0.8
SNX4-204ENST00000473417 TMEM143Q96AN5 459 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 ZNF396Q96N95 335 aaPredicted RBP20.04■□□□□ 0.8
SNX4-204ENST00000473417 LRFN3Q9BTN0 628 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 MMTAG2Q9BU76 263 aaKnown RBP20.04■□□□□ 0.8
SNX4-204ENST00000473417 MRPL9Q9BYD2 267 aaKnown RBP20.04■□□□□ 0.8
SNX4-204ENST00000473417 AGPAT5Q9NUQ2 364 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 DDX19AQ9NUU7 478 aaKnown RBP20.04■□□□□ 0.8
SNX4-204ENST00000473417 CLEC1BQ9P126 229 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 CD207Q9UJ71 328 aa20.04■□□□□ 0.8
SNX4-204ENST00000473417 MUTP22033 750 aa20.03■□□□□ 0.8
SNX4-204ENST00000473417 SSTR3P32745 418 aaPredicted RBP20.03■□□□□ 0.8
SNX4-204ENST00000473417 PBX3P40426 434 aa20.03■□□□□ 0.8
SNX4-204ENST00000473417 CATSPER4Q7RTX7 472 aa20.03■□□□□ 0.8
SNX4-204ENST00000473417 RBM23Q86U06 439 aaKnown RBP20.03■□□□□ 0.8
SNX4-204ENST00000473417 ADHFE1Q8IWW8 467 aa20.03■□□□□ 0.8
SNX4-204ENST00000473417 TCP11Q8WWU5 503 aa20.03■□□□□ 0.8
SNX4-204ENST00000473417 PRPF31Q8WWY3 499 aaKnown RBP20.03■□□□□ 0.8
SNX4-204ENST00000473417 MTRQ99707 1265 aa20.03■□□□□ 0.8
SNX4-204ENST00000473417 FAM105AQ9NUU6 356 aa20.03■□□□□ 0.8
SNX4-204ENST00000473417 DBR1Q9UK59 544 aaKnown RBP20.03■□□□□ 0.8
SNX4-204ENST00000473417 FSD2A1L4K1 749 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 C19orf67A6NJJ6 358 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 GPR37L1O60883 481 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 DGAT1O75907 488 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 EYA4O95677 639 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 SKIP12755 728 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 RAB27AP51159 221 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 LAMTOR4Q0VGL1 99 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 SRGAP1Q7Z6B7 1085 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 MICAL1Q8TDZ2 1067 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 PLIN2Q99541 437 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 CDCA3Q99618 268 aaPredicted RBP20.02■□□□□ 0.8
SNX4-204ENST00000473417 TLE6Q9H808 572 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 MINDY3Q9H8M7 445 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 XPNPEP1Q9NQW7 623 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 ZDHHC9Q9Y397 364 aa20.02■□□□□ 0.8
SNX4-204ENST00000473417 ARHGEF35A5YM69 484 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 E9PMD0 336 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 USO1O60763 962 aaKnown RBP20.01■□□□□ 0.79
SNX4-204ENST00000473417 ZNF623O75123 536 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 BRD1O95696 1058 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 LONP1P36776 959 aaKnown RBP20.01■□□□□ 0.79
SNX4-204ENST00000473417 NASPP49321 788 aaPredicted RBP20.01■□□□□ 0.79
SNX4-204ENST00000473417 COASYQ13057 564 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 SLC39A14Q15043 492 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 STK38Q15208 465 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 DUSP6Q16828 381 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 MAEAQ7L5Y9 396 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 CABP7Q86V35 215 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 SLC39A11Q8N1S5 342 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 SMRP1Q8NCR6 262 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 LPPQ93052 612 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 AK8Q96MA6 479 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 PNMA5Q96PV4 448 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 BHMT2Q9H2M3 363 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 C11orf16Q9NQ32 467 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 SPG21Q9NZD8 308 aa20.01■□□□□ 0.79
SNX4-204ENST00000473417 PUF60Q9UHX1 559 aaKnown RBP20.01■□□□□ 0.79
SNX4-204ENST00000473417 FBXO2Q9UK22 296 aaPredicted RBP20.01■□□□□ 0.79
SNX4-204ENST00000473417 BARX2Q9UMQ3 279 aaPredicted RBP20.01■□□□□ 0.79
SNX4-204ENST00000473417 MEIS3P2A8K0S8 358 aa20■□□□□ 0.79
SNX4-204ENST00000473417 PER2O15055 1255 aa20■□□□□ 0.79
SNX4-204ENST00000473417 ASAP2O43150 1006 aa20■□□□□ 0.79
SNX4-204ENST00000473417 SRGAP2CP0DJJ0 459 aa20■□□□□ 0.79
SNX4-204ENST00000473417 UBA7P41226 1012 aa20■□□□□ 0.79
SNX4-204ENST00000473417 SPECC1Q5M775 1068 aa20■□□□□ 0.79
SNX4-204ENST00000473417 PLPP4Q5VZY2 271 aa20■□□□□ 0.79
SNX4-204ENST00000473417 PADI6Q6TGC4 694 aa20■□□□□ 0.79
SNX4-204ENST00000473417 VN1R2Q8NFZ6 395 aa20■□□□□ 0.79
SNX4-204ENST00000473417 CLIC6Q96NY7 704 aa20■□□□□ 0.79
SNX4-204ENST00000473417 POP1Q99575 1024 aaKnown RBP20■□□□□ 0.79
SNX4-204ENST00000473417 TCF25Q9BQ70 676 aa20■□□□□ 0.79
SNX4-204ENST00000473417 CSRNP2Q9H175 543 aa20■□□□□ 0.79
SNX4-204ENST00000473417 ENTPD7Q9NQZ7 604 aa20■□□□□ 0.79
SNX4-204ENST00000473417 DNM3Q9UQ16 869 aa20■□□□□ 0.79
SNX4-204ENST00000473417 SRPRBQ9Y5M8 271 aaKnown RBP20■□□□□ 0.79
SNX4-204ENST00000473417 ALADP13716 330 aa19.99■□□□□ 0.79
SNX4-204ENST00000473417 BCAR1P56945 870 aa19.99■□□□□ 0.79
SNX4-204ENST00000473417 RBM10P98175 930 aaKnown RBP19.99■□□□□ 0.79
SNX4-204ENST00000473417 KRT17Q04695 432 aa19.99■□□□□ 0.79
SNX4-204ENST00000473417 KCNC3Q14003 757 aa19.99■□□□□ 0.79
SNX4-204ENST00000473417 HYIQ5T013 277 aa19.99■□□□□ 0.79
SNX4-204ENST00000473417 GLB1LQ6UWU2 654 aa19.99■□□□□ 0.79
SNX4-204ENST00000473417 KCNK18Q7Z418 384 aa19.99■□□□□ 0.79
SNX4-204ENST00000473417 RNF149Q8NC42 400 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms