RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 DENND3A2RUS2 1198 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 LINC01553A4QN01 128 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 LRRIQ4A6NIV6 560 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 IBSPP21815 317 aaPredicted RBP14.5□□□□□ -0.09
TPM3-216ENST00000473036 SFPQP23246 707 aaKnown RBP eCLIP14.5□□□□□ -0.09
TPM3-216ENST00000473036 PHKA2P46019 1235 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 NPTX2P47972 431 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 PEX3P56589 373 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 RESP18Q5W5W9 173 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 SLC24A5Q71RS6 500 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 GPBP1Q86WP2 473 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 CDR2LQ86X02 465 aaPredicted RBP14.5□□□□□ -0.09
TPM3-216ENST00000473036 ECHDC2Q86YB7 292 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 PDILTQ8N807 584 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 KCNG4Q8TDN1 519 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 LARP4BQ92615 738 aaKnown RBP14.5□□□□□ -0.09
TPM3-216ENST00000473036 FIZ1Q96SL8 496 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 REEP2Q9BRK0 252 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 ZBED2Q9BTP6 218 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 FZD8Q9H461 694 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 EPHX3Q9H6B9 360 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 CERS4Q9HA82 394 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 HCSTQ9UBK5 93 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 CFAP45Q9UL16 551 aa14.5□□□□□ -0.09
TPM3-216ENST00000473036 PIN4Q9Y237 131 aaKnown RBP14.5□□□□□ -0.09
TPM3-216ENST00000473036 A0A0U1RQF3 1178 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 MYMKA6NI61 221 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 INO80B-WBP1J3KQ70 363 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 RFXAPO00287 272 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 LPXNO60711 386 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 FGFR1P11362 822 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 ARF4P18085 180 aaPredicted RBP14.49□□□□□ -0.09
TPM3-216ENST00000473036 NAMPTP43490 491 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 ME1P48163 572 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 GIT2Q14161 759 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 TFDP1Q14186 410 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 PUS10Q3MIT2 529 aaKnown RBP14.49□□□□□ -0.09
TPM3-216ENST00000473036 CLLU1OSQ5K130 101 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 RRAGBQ5VZM2 374 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 NPAS4Q8IUM7 802 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 KIFAP3Q92845 792 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 LPPQ93052 612 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 DNAJC19Q96DA6 116 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 TRAIPQ9BWF2 469 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 EIF2AQ9BY44 585 aaKnown RBP14.49□□□□□ -0.09
TPM3-216ENST00000473036 INO80BQ9C086 356 aaPredicted RBP14.49□□□□□ -0.09
TPM3-216ENST00000473036 CHST12Q9NRB3 414 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 INSL6Q9Y581 213 aa14.49□□□□□ -0.09
TPM3-216ENST00000473036 PRR33A8MZF0 331 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 ZSCAN20P17040 1043 aaPredicted RBP14.48□□□□□ -0.09
TPM3-216ENST00000473036 AFF1P51825 1210 aaKnown RBP14.48□□□□□ -0.09
TPM3-216ENST00000473036 ZNF131P52739 623 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 KRT85P78386 507 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 FAM187BQ17R55 369 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 LONRF3Q496Y0 759 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 ODR4Q5SWX8 454 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 NT5DC1Q5TFE4 455 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 LRRC55Q6ZSA7 311 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 SMG8Q8ND04 991 aaKnown RBP14.48□□□□□ -0.09
TPM3-216ENST00000473036 STAMQ92783 540 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 YME1L1Q96TA2 773 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 C17orf80Q9BSJ5 609 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 KCNH6Q9H252 994 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 C1orf112Q9NSG2 853 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 ARHGAP28Q9P2N2 729 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 ATG2AQ2TAZ0 1938 aa14.48□□□□□ -0.09
TPM3-216ENST00000473036 COL4A4P53420 1690 aaPredicted RBP14.48□□□□□ -0.09
TPM3-216ENST00000473036 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.47□□□□□ -0.09
TPM3-216ENST00000473036 A0A1B0GUA9 196 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 NCLP19338 710 aaKnown RBP14.47□□□□□ -0.09
TPM3-216ENST00000473036 ERVK-21P61565 698 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 LEXMQ3ZCV2 418 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 PAN2Q504Q3 1202 aaKnown RBP14.47□□□□□ -0.09
TPM3-216ENST00000473036 EEF1DP3Q658K8 133 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 TMEM161BQ8NDZ6 487 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 RASSF8Q8NHQ8 419 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 SPATA32Q96LK8 384 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 CASD1Q96PB1 797 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 TGS1Q96RS0 853 aaKnown RBP14.47□□□□□ -0.09
TPM3-216ENST00000473036 NTPCRQ9BSD7 190 aaKnown RBP14.47□□□□□ -0.09
TPM3-216ENST00000473036 RNF39Q9H2S5 420 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 ELAC1Q9H777 363 aaKnown RBP14.47□□□□□ -0.09
TPM3-216ENST00000473036 FAM105AQ9NUU6 356 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 TMEM161AQ9NX61 479 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 KCND2Q9NZV8 630 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 STK17AQ9UEE5 414 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 CCDC39Q9UFE4 941 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 PCDHB7Q9Y5E2 793 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 MRPL42Q9Y6G3 142 aaKnown RBP14.47□□□□□ -0.09
TPM3-216ENST00000473036 MUC6Q6W4X9 2439 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 MYO7AQ13402 2215 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 C5orf42Q9H799 3197 aa14.47□□□□□ -0.09
TPM3-216ENST00000473036 RALGAPA2Q2PPJ7 1873 aa14.46□□□□□ -0.09
TPM3-216ENST00000473036 A0A1B0GVL5 298 aa14.46□□□□□ -0.09
TPM3-216ENST00000473036 CCDC169A6NNP5 214 aa14.46□□□□□ -0.09
TPM3-216ENST00000473036 ACKR2O00590 384 aa14.46□□□□□ -0.09
TPM3-216ENST00000473036 SLC16A4O15374 487 aa14.46□□□□□ -0.09
TPM3-216ENST00000473036 POLR2DO15514 142 aaKnown RBP14.46□□□□□ -0.09
TPM3-216ENST00000473036 ZNF623O75123 536 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms