RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 TECP42680 631 aa17.03■□□□□ 0.32
VTI1A-203ENST00000472892 RARRES1P49788 294 aa17.03■□□□□ 0.32
VTI1A-203ENST00000472892 BMS1Q14692 1282 aaKnown RBP17.03■□□□□ 0.32
VTI1A-203ENST00000472892 SAFBQ15424 915 aaKnown RBP eCLIP17.03■□□□□ 0.32
VTI1A-203ENST00000472892 SYCE2Q6PIF2 218 aa17.03■□□□□ 0.32
VTI1A-203ENST00000472892 DDX53Q86TM3 631 aaKnown RBP17.03■□□□□ 0.32
VTI1A-203ENST00000472892 TMEM173Q86WV6 379 aaPredicted RBP17.03■□□□□ 0.32
VTI1A-203ENST00000472892 IFNLR1Q8IU57 520 aaPredicted RBP17.03■□□□□ 0.32
VTI1A-203ENST00000472892 TMEM169Q96HH4 297 aa17.03■□□□□ 0.32
VTI1A-203ENST00000472892 IGSF21Q96ID5 467 aa17.03■□□□□ 0.32
VTI1A-203ENST00000472892 PHF7Q9BWX1 381 aaPredicted RBP17.03■□□□□ 0.32
VTI1A-203ENST00000472892 TMEM60Q9H2L4 133 aa17.03■□□□□ 0.32
VTI1A-203ENST00000472892 INPP5FQ9Y2H2 1132 aa17.03■□□□□ 0.32
VTI1A-203ENST00000472892 HCN4Q9Y3Q4 1203 aa17.03■□□□□ 0.32
VTI1A-203ENST00000472892 CNTNAP2Q9UHC6 1331 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 CXCL14O95715 111 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 SPATA31C1P0DKV0 1188 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 HOXB8P17481 243 aaPredicted RBP17.02■□□□□ 0.32
VTI1A-203ENST00000472892 NCLP19338 710 aaKnown RBP17.02■□□□□ 0.32
VTI1A-203ENST00000472892 AXLP30530 894 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 GUCY1B3Q02153 619 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 RNASELQ05823 741 aaKnown RBP17.02■□□□□ 0.32
VTI1A-203ENST00000472892 TFDP1Q14186 410 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 ZNF280BQ86YH2 543 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 CCDC83Q8IWF9 413 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 VPS52Q8N1B4 723 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 CNNM3Q8NE01 707 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 C8orf76Q96K31 380 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.32
VTI1A-203ENST00000472892 KIF2CQ99661 725 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 NFKBIZQ9BYH8 718 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 ZBP1Q9H171 429 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 KANSL3Q9P2N6 904 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 MUTYHQ9UIF7 546 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 HCFC2Q9Y5Z7 792 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 IRAK3Q9Y616 596 aa17.02■□□□□ 0.32
VTI1A-203ENST00000472892 A0A087WWV3 80 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 B4GALT3O60512 393 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 TSPAN1O60635 241 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 CLASP2O75122 1294 aaKnown RBP17.01■□□□□ 0.31
VTI1A-203ENST00000472892 DDHD2O94830 711 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 ERLIN2O94905 339 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 ATP2B1P20020 1258 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 MCM7P33993 719 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 PLA2G5P39877 138 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 AFF1P51825 1210 aaKnown RBP17.01■□□□□ 0.31
VTI1A-203ENST00000472892 GIT2Q14161 759 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 LLGL2Q6P1M3 1020 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 CATSPER3Q86XQ3 398 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 SMG8Q8ND04 991 aaKnown RBP17.01■□□□□ 0.31
VTI1A-203ENST00000472892 FBXO18Q8NFZ0 1043 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 URGCPQ8TCY9 931 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 ASAP3Q8TDY4 903 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 PIGOQ8TEQ8 1089 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 BCL7CQ8WUZ0 217 aaPredicted RBP17.01■□□□□ 0.31
VTI1A-203ENST00000472892 CASP10Q92851 521 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 FOXP1Q9H334 677 aaPredicted RBP17.01■□□□□ 0.31
VTI1A-203ENST00000472892 RSAD1Q9HA92 442 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 UBN1Q9NPG3 1134 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 DNAJB4Q9UDY4 337 aa17.01■□□□□ 0.31
VTI1A-203ENST00000472892 POTEMA6NI47 508 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 ALDH2P05091 517 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 CTSAP10619 480 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 GLRA2P23416 452 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 SLC11A1P49279 550 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 MBTD1Q05BQ5 628 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 NCBP1Q09161 790 aaKnown RBP17■□□□□ 0.31
VTI1A-203ENST00000472892 ORC2Q13416 577 aaPredicted RBP17■□□□□ 0.31
VTI1A-203ENST00000472892 CAPSQ13938 189 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 PIP4P2Q8N4L2 257 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 FAM122AQ96E09 287 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 TMEM175Q9BSA9 504 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 TUFT1Q9NNX1 390 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
VTI1A-203ENST00000472892 IPPQ9Y573 584 aa17■□□□□ 0.31
VTI1A-203ENST00000472892 INO80B-WBP1J3KQ70 363 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 INPPL1O15357 1258 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 MED24O75448 989 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
VTI1A-203ENST00000472892 ITGA4P13612 1032 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
VTI1A-203ENST00000472892 HMGN5P82970 282 aaKnown RBP16.99■□□□□ 0.31
VTI1A-203ENST00000472892 AMHR2Q16671 573 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 NOTUMQ6P988 496 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 AUTS2Q8WXX7 1259 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 EDAQ92838 391 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 RPGRIP1Q96KN7 1286 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 CCDC43Q96MW1 224 aaKnown RBP16.99■□□□□ 0.31
VTI1A-203ENST00000472892 NACC1Q96RE7 527 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 POLR3CQ9BUI4 534 aaPredicted RBP16.99■□□□□ 0.31
VTI1A-203ENST00000472892 VN1R3Q9BXE9 311 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 EIF2AQ9BY44 585 aaKnown RBP16.99■□□□□ 0.31
VTI1A-203ENST00000472892 GBP3Q9H0R5 595 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 CSRNP2Q9H175 543 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 STK39Q9UEW8 545 aa16.99■□□□□ 0.31
VTI1A-203ENST00000472892 DBR1Q9UK59 544 aaKnown RBP16.99■□□□□ 0.31
VTI1A-203ENST00000472892 ARID2Q68CP9 1835 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 POMCP01189 267 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 ARF4P18085 180 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms