RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PRAMEF19Q5SWL8 479 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 CBWD1Q9BRT8 395 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 KATNAL1Q9BW62 490 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 PCIF1Q9H4Z3 704 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 FAM207AQ9NSI2 230 aaPredicted RBP15.94■□□□□ 0.14
HIF3A-206ENST00000472815 CEP72Q9P209 647 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 DAAM1Q9Y4D1 1078 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 C22orf31O95567 290 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 FECHP22830 423 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 IGBP1P78318 339 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 POU5F1BQ06416 359 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 GOLGA8FQ08AF8 430 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 GOLGA8DPQ0D2H9 430 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 PPFIA1Q13136 1202 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 MAPK6Q16659 721 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 CDCA2Q69YH5 1023 aaPredicted RBP15.94■□□□□ 0.14
HIF3A-206ENST00000472815 RHPN2Q8IUC4 686 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 TMEM139Q8IV31 216 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 RNF149Q8NC42 400 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 MAP7D2Q96T17 732 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 IKZF4Q9H2S9 585 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 PLCB1Q9NQ66 1216 aa15.94■□□□□ 0.14
HIF3A-206ENST00000472815 EVPLQ92817 2033 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 GOLGA6L9A6NEM1 432 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 P4HA2O15460 535 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 KPNA6O60684 536 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 IGHA2P01877 340 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 VAMP7P51809 220 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 CDC42EP1Q00587 391 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 SNRNP35Q16560 246 aaKnown RBP15.93■□□□□ 0.14
HIF3A-206ENST00000472815 ZPBP2Q6X784 338 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 GPD1LQ8N335 351 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 LRRC71Q8N4P6 559 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 RDH13Q8NBN7 331 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 LSM14BQ9BX40 385 aaKnown RBP15.93■□□□□ 0.14
HIF3A-206ENST00000472815 MRPL4Q9BYD3 311 aaKnown RBP15.93■□□□□ 0.14
HIF3A-206ENST00000472815 NFKBIZQ9BYH8 718 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 SPC25Q9HBM1 224 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 ZSWIM8A7E2V4 1837 aa15.93■□□□□ 0.14
HIF3A-206ENST00000472815 ANKRD63C9JTQ0 380 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 KLRC1P26715 233 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 MATR3P43243 847 aaKnown RBP eCLIP15.92■□□□□ 0.14
HIF3A-206ENST00000472815 PHKA2P46019 1235 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 FMO5P49326 533 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 FLT3LGP49771 235 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 KLK7P49862 253 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 ARHGEF6Q15052 776 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 GRIK4Q16099 956 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 DNTTIP2Q5QJE6 756 aaKnown RBP15.92■□□□□ 0.14
HIF3A-206ENST00000472815 FMNL3Q8IVF7 1028 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 TRAPPC12Q8WVT3 735 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 GCNT4Q9P109 453 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 STYXL1Q9Y6J8 313 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 NRCAMQ92823 1304 aa15.92■□□□□ 0.14
HIF3A-206ENST00000472815 GPR25O00155 361 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 ADCY6O43306 1168 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 DUSP11O75319 330 aaKnown RBP15.91■□□□□ 0.14
HIF3A-206ENST00000472815 F2P00734 622 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 GNRH1P01148 92 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 SRGAP2CP0DJJ0 459 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 ADSSP30520 456 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 KCNMA1Q12791 1236 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 MTHFD1LQ6UB35 978 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 TAS1R3Q7RTX0 852 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 CCAR2Q8N163 923 aaKnown RBP15.91■□□□□ 0.14
HIF3A-206ENST00000472815 FBXL18Q96ME1 805 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 ZNF233A6NK53 670 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 TISP43B9A030 160 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 KIF2AO00139 706 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-206ENST00000472815 EXTL3O43909 919 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 ZEB2O60315 1214 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 IPO7O95373 1038 aaKnown RBP15.91■□□□□ 0.14
HIF3A-206ENST00000472815 TUBB4AP04350 444 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 RFX1P22670 979 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 CTGFP29279 349 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 CLCN3P51790 818 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 CDK17Q00537 523 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 MYL7Q01449 175 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 DRP2Q13474 957 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-206ENST00000472815 CCDC155Q8N6L0 562 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 TMC2Q8TDI7 906 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 SYN2Q92777 582 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-206ENST00000472815 NLRP4Q96MN2 994 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 CRACR2AQ9BSW2 395 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 AGPAT5Q9NUQ2 364 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 FBXL5Q9UKA1 691 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 AGO2Q9UKV8 859 aaKnown RBP15.91■□□□□ 0.14
HIF3A-206ENST00000472815 PLAGL2Q9UPG8 496 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 AKT3Q9Y243 479 aa15.91■□□□□ 0.14
HIF3A-206ENST00000472815 PMM2O15305 246 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 FKTNO75072 461 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 PRKCBP05771 671 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 CCDC175P0C221 793 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 CYBAP13498 195 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 GTF2H1P32780 548 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 CYLC1P35663 651 aaPredicted RBP15.9■□□□□ 0.14
HIF3A-206ENST00000472815 PRKCZQ05513 592 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
HIF3A-206ENST00000472815 MEA1Q16626 185 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms