RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 VCAM1P19320 739 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 LMNB1P20700 586 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 SCP2P22307 547 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 FSHRP23945 695 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 PON1P27169 355 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 NMT1P30419 496 aaKnown RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 SMTNP53814 917 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 BACE1P56817 501 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 PSMC5P62195 406 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 UBXN2AP68543 259 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 GFPT1Q06210 699 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 DMTNQ08495 405 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 SMC1AQ14683 1233 aaKnown RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 HSP90B2PQ58FF3 399 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 ARHGEF16Q5VV41 709 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 ZNF746Q6NUN9 644 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 INTS8Q75QN2 995 aaKnown RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 OTUD6AQ7L8S5 288 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 BPHLQ86WA6 291 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 SYCE1Q8N0S2 351 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 CPXCR1Q8N123 301 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 GOLGA6L1Q8N7Z2 621 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 FAM133AQ8N9E0 248 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 SLC35C1Q96A29 364 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 GPRASP2Q96D09 838 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 TRERF1Q96PN7 1200 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 OSBPL9Q96SU4 736 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 SENP7Q9BQF6 1050 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 RHOXF2Q9BQY4 288 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 CRACR2AQ9BSW2 395 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 C1QTNF2Q9BXJ5 285 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 STK33Q9BYT3 514 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 RPAP3Q9H6T3 665 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 VIPAS39Q9H9C1 493 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 C17orf75Q9HAS0 396 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 RAVER2Q9HCJ3 691 aaKnown RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 AGPAT3Q9NRZ7 376 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 DMAC2Q9NW81 257 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 TMOD4Q9NZQ9 345 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 GCNT4Q9P109 453 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 RGS17Q9UGC6 210 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 CNOT7Q9UIV1 285 aaKnown RBP8.31□□□□□ -1.08
CCDC171-205ENST00000472806 ZNF112Q9UJU3 913 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 FER1L6Q2WGJ9 1857 aa8.31□□□□□ -1.08
CCDC171-205ENST00000472806 MYPNQ86TC9 1320 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 A0A0A6YYK5 440 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-205ENST00000472806 DDX39AO00148 427 aaKnown RBP8.3□□□□□ -1.08
CCDC171-205ENST00000472806 NFIBO00712 420 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 MAP2K7O14733 419 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 CLIC2O15247 247 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 EXOC3O60645 756 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 SEC31AO94979 1220 aaKnown RBP8.3□□□□□ -1.08
CCDC171-205ENST00000472806 H2AFZP0C0S5 128 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 VSIG8P0DPA2 414 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 TAL1P17542 331 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-205ENST00000472806 SLC9A1P19634 815 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 HOXD13P35453 343 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 FMO5P49326 533 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 RARRES1P49788 294 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 GMPSP49915 693 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-205ENST00000472806 NPEPPSP55786 919 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 MYL7Q01449 175 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 ENPEPQ07075 957 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 BFSP1Q12934 665 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 PGM5Q15124 567 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 CLUL1Q15846 466 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 KIAA0753Q2KHM9 967 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 GNPTABQ3T906 1256 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 SUPT20HL1Q3ZLR7 823 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 BEND6Q5SZJ8 279 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-205ENST00000472806 H2AFVQ71UI9 128 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 DEFB132Q7Z7B7 95 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 MEIOBQ8N635 442 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 ZNF280CQ8ND82 737 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 BANK1Q8NDB2 785 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 ATP6V0A1Q93050 837 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 BORCS6Q96GS4 357 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 PBKQ96KB5 322 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 CAPZA3Q96KX2 299 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 FAM81BQ96LP2 452 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 MMS19Q96T76 1030 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 RMDN3Q96TC7 470 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 PDCD2LQ9BRP1 358 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 SELENOOQ9BVL4 669 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 FUT8Q9BYC5 575 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 GLIS2Q9BZE0 524 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-205ENST00000472806 MLXIPQ9HAP2 919 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 SLC24A3Q9HC58 644 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 MED4Q9NPJ6 270 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 PXMP2Q9NR77 195 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 RNF146Q9NTX7 359 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 HDAC6Q9UBN7 1215 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 HACL1Q9UJ83 578 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 PCDHGC5Q9Y5F6 944 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 CAPN6Q9Y6Q1 641 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 ZHX2Q9Y6X8 837 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 ZMYM2Q9UBW7 1377 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 DOCK1Q14185 1865 aa8.3□□□□□ -1.08
CCDC171-205ENST00000472806 SFI1A8K8P3 1242 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms