RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 SLC16A4O15374 487 aa22■■□□□ 1.11
SF1-213ENST00000472725 TSPAN1O60635 241 aa22■■□□□ 1.11
SF1-213ENST00000472725 GADD45BO75293 160 aaPredicted RBP22■■□□□ 1.11
SF1-213ENST00000472725 PRKCBP05771 671 aa22■■□□□ 1.11
SF1-213ENST00000472725 AFMP43652 599 aa22■■□□□ 1.11
SF1-213ENST00000472725 ASIC1P78348 528 aa22■■□□□ 1.11
SF1-213ENST00000472725 AMHR2Q16671 573 aa22■■□□□ 1.11
SF1-213ENST00000472725 NOTUMQ6P988 496 aa22■■□□□ 1.11
SF1-213ENST00000472725 HAUS6Q7Z4H7 955 aa22■■□□□ 1.11
SF1-213ENST00000472725 HVCN1Q96D96 273 aa22■■□□□ 1.11
SF1-213ENST00000472725 ELAC1Q9H777 363 aaKnown RBP22■■□□□ 1.11
SF1-213ENST00000472725 CXXC1Q9P0U4 656 aaPredicted RBP22■■□□□ 1.11
SF1-213ENST00000472725 PIN4Q9Y237 131 aaKnown RBP22■■□□□ 1.11
SF1-213ENST00000472725 CNTNAP2Q9UHC6 1331 aa22■■□□□ 1.11
SF1-213ENST00000472725 C9IYK1 514 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 FGFR4P22455 802 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 HOXA11P31270 313 aaPredicted RBP21.99■■□□□ 1.11
SF1-213ENST00000472725 SARSP49591 514 aaKnown RBP21.99■■□□□ 1.11
SF1-213ENST00000472725 RAB27AP51159 221 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 FAM189BP81408 668 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 STRN3Q13033 797 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 PRPF4BQ13523 1007 aaKnown RBP21.99■■□□□ 1.11
SF1-213ENST00000472725 LRIT3Q3SXY7 679 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 TPRNQ4KMQ1 711 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 HERC4Q5GLZ8 1057 aaPredicted RBP21.99■■□□□ 1.11
SF1-213ENST00000472725 RTN4RL1Q86UN2 441 aaPredicted RBP21.99■■□□□ 1.11
SF1-213ENST00000472725 SFR1Q86XK3 245 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 LINC01599Q8WXQ3 324 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 TOP1MTQ969P6 601 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 FIZ1Q96SL8 496 aa21.99■■□□□ 1.11
SF1-213ENST00000472725 A0A0U1RQF3 1178 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.98■■□□□ 1.11
SF1-213ENST00000472725 A0A1B0GUA9 196 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.98■■□□□ 1.11
SF1-213ENST00000472725 MGEA5O60502 916 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 KINO60870 393 aaKnown RBP21.98■■□□□ 1.11
SF1-213ENST00000472725 STAG3L1P0CL83 205 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 ARF4P18085 180 aaPredicted RBP21.98■■□□□ 1.11
SF1-213ENST00000472725 GTF2BQ00403 316 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 COASYQ13057 564 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 STXBP4Q6ZWJ1 553 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 ZNF720Q7Z2F6 126 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 APBB1IPQ7Z5R6 666 aaPredicted RBP21.98■■□□□ 1.11
SF1-213ENST00000472725 RSPH1Q8WYR4 309 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 CCDC47Q96A33 483 aaKnown RBP21.98■■□□□ 1.11
SF1-213ENST00000472725 KIFC3Q9BVG8 833 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 MRPL4Q9BYD3 311 aaKnown RBP21.98■■□□□ 1.11
SF1-213ENST00000472725 PCDHB13Q9Y5F0 798 aa21.98■■□□□ 1.11
SF1-213ENST00000472725 K7ENM7 598 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 N4BP3O15049 544 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 ZNF623O75123 536 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 NR1I2O75469 434 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 EOMESO95936 686 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 ATP2A2P16615 1042 aaKnown RBP21.97■■□□□ 1.11
SF1-213ENST00000472725 LIG1P18858 919 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 EHHADHQ08426 723 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 PSMD2Q13200 908 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 CUL4BQ13620 913 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 TWF2Q6IBS0 349 aaKnown RBP21.97■■□□□ 1.11
SF1-213ENST00000472725 ZPBP2Q6X784 338 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.97■■□□□ 1.11
SF1-213ENST00000472725 NPAS4Q8IUM7 802 aa21.97■■□□□ 1.11
SF1-213ENST00000472725 MRPL44Q9H9J2 332 aaKnown RBP21.97■■□□□ 1.11
SF1-213ENST00000472725 POSTNQ15063 836 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 SLC27A1Q6PCB7 646 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 TAS1R3Q7RTX0 852 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 MYOCDQ8IZQ8 938 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 CRIPAKQ8N1N5 446 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 STRA6Q9BX79 667 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 BLZF1Q9H2G9 400 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 LMBRD1Q9NUN5 540 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 TMEM161AQ9NX61 479 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 TBX20Q9UMR3 447 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 TNFSF13BQ9Y275 285 aa21.96■■□□□ 1.11
SF1-213ENST00000472725 PPP1R37O75864 691 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 GJB5O95377 273 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 DEFB103AP81534 67 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 SMAD3P84022 425 aaKnown RBP21.95■■□□□ 1.1
SF1-213ENST00000472725 DPYDQ12882 1025 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 HERC6Q8IVU3 1022 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 GRAMD1CQ8IYS0 662 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 ADPGKQ9BRR6 497 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 GTPBP4Q9BZE4 634 aaKnown RBP21.95■■□□□ 1.1
SF1-213ENST00000472725 FAM105AQ9NUU6 356 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 PCDHB7Q9Y5E2 793 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 PTPRSQ13332 1948 aa21.95■■□□□ 1.1
SF1-213ENST00000472725 HOXA2O43364 376 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 KLRC4O43908 158 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 PIGRP01833 764 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 NMT1P30419 496 aaKnown RBP21.94■■□□□ 1.1
SF1-213ENST00000472725 KCNB1Q14721 858 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 FAM26FQ5R3K3 315 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 NT5DC1Q5TFE4 455 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 ATF7IP2Q5U623 682 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 ECHDC2Q86YB7 292 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 MAP4K3Q8IVH8 894 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 HACE1Q8IYU2 909 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 PGBD4Q96DM1 585 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 ACO2Q99798 780 aaKnown RBP21.94■■□□□ 1.1
SF1-213ENST00000472725 EXOC1Q9NV70 894 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms