RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ZNF384Q8TF68 577 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.19□□□□□ -1.74
XRN1-209ENST00000472625 NUP133Q8WUM0 1156 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 LINC01599Q8WXQ3 324 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 KLHL6Q8WZ60 621 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 FRAT1Q92837 279 aaPredicted RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 CCDC17Q96LX7 622 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 SEZ6LQ9BYH1 1024 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 SENP6Q9GZR1 1112 aaPredicted RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 SPATC1LQ9H0A9 340 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 PORCNQ9H237 461 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 MTIF3Q9H2K0 278 aaKnown RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 RPAP3Q9H6T3 665 aaPredicted RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 DNAJC18Q9H819 358 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 SPC25Q9HBM1 224 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 TXNRD2Q9NNW7 524 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 MTMR10Q9NXD2 777 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 RBPJLQ9UBG7 517 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 SUCOQ9UBS9 1254 aaKnown RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 DUSP13Q9UII6 198 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 TMEM59LQ9UK28 342 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 PALD1Q9ULE6 856 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 CNPY2Q9Y2B0 182 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 EFR3BQ9Y2G0 817 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 NOP58Q9Y2X3 529 aaKnown RBP4.19□□□□□ -1.74
XRN1-209ENST00000472625 MGAMO43451 1857 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 PTPRFP10586 1907 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 AK9Q5TCS8 1911 aa4.19□□□□□ -1.74
XRN1-209ENST00000472625 PRUNE2Q8WUY3 3088 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 DDX60LQ5H9U9 1706 aaKnown RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 PNMA6EA0A0J9YXQ4 647 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 MPHOSPH10O00566 681 aaKnown RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 FLOT1O75955 427 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 CLTBP09497 229 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 IFIT2P09913 472 aaKnown RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 AKR1A1P14550 325 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 FOSL2P15408 326 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 GUCY2CP25092 1073 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 CFPP27918 469 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 ADORA2AP29274 412 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 CCND3P30281 292 aaPredicted RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 GBP1P32455 592 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 RAP1GAPP47736 663 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 GALK1P51570 392 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 RTP1P59025 263 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 ATP8B2P98198 1209 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 ICA1Q05084 483 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 EGR3Q06889 387 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 LRRC26Q2I0M4 334 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 AXDND1Q5T1B0 1012 aaPredicted RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 MIGA1Q8NAN2 632 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 ABHD4Q8TB40 342 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 SYTL5Q8TDW5 730 aaPredicted RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 KIF1BPQ96EK5 621 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 GPATCH3Q96I76 525 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 TOX2Q96NM4 488 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 TM9SF2Q99805 663 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 RNF32Q9H0A6 362 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 ATP8A2Q9NTI2 1148 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 MCM9Q9NXL9 1143 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 FAM53CQ9NYF3 392 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 ARPP21Q9UBL0 812 aaPredicted RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 SAP30BPQ9UHR5 308 aaKnown RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 DBNLQ9UJU6 430 aaKnown RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 SYNPO2Q9UMS6 1093 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 ATP11BQ9Y2G3 1177 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 DIS3Q9Y2L1 958 aaKnown RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 CTDP1Q9Y5B0 961 aaPredicted RBP4.18□□□□□ -1.74
XRN1-209ENST00000472625 PHIPQ8WWQ0 1821 aa4.18□□□□□ -1.74
XRN1-209ENST00000472625 A0A1W2PQH9 124 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 FAM86C2PA6NEL3 165 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 SIGLEC6O43699 453 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 PRAMEF1O95521 474 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 HPXP02790 462 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 KRT1P04264 644 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 TCF3P15923 654 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 ATF4P18848 351 aaPredicted RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 SHMT1P34896 483 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 NASPP49321 788 aaPredicted RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 PMS1P54277 932 aaKnown RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 FPGSQ05932 587 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 NMIQ13287 307 aaPredicted RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 COL9A2Q14055 689 aaPredicted RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 PLS1Q14651 629 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 CCL14Q16627 93 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 SLC9C2Q5TAH2 1124 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 TDRD10Q5VZ19 366 aaKnown RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 PSRC1Q6PGN9 363 aaPredicted RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 SLC39A5Q6ZMH5 540 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 ADGRA1Q86SQ6 560 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 AACSQ86V21 672 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 C1QL4Q86Z23 238 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 LRRC56Q8IYG6 542 aaPredicted RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 TMEM57Q8N5G2 664 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 PCSK9Q8NBP7 692 aaKnown RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 DAGLBQ8NCG7 672 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 MAFAQ8NHW3 353 aaPredicted RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 MYLIPQ8WY64 445 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 TCTN2Q96GX1 697 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms