RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 FXR1P51114 621 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNX13-205ENST00000471744 HTRA4P83105 476 aaPredicted RBP16.66■□□□□ 0.26
SNX13-205ENST00000471744 AMHR2Q16671 573 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 MRPS27Q92552 414 aaKnown RBP16.66■□□□□ 0.26
SNX13-205ENST00000471744 KCNN1Q92952 543 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 TIFAQ96CG3 184 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 YME1L1Q96TA2 773 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 POLD4Q9HCU8 107 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 TMEM161AQ9NX61 479 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 SEL1LQ9UBV2 794 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 CNTNAP2Q9UHC6 1331 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 FNDC1Q4ZHG4 1894 aaPredicted RBP16.65■□□□□ 0.26
SNX13-205ENST00000471744 NPHP3-ACAD11A0A0J9YXS1 232 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 MYMKA6NI61 221 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 SFI1A8K8P3 1242 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 ACKR2O00590 384 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 GAP43P17677 238 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 HOXA11P31270 313 aaPredicted RBP16.65■□□□□ 0.26
SNX13-205ENST00000471744 SYKP43405 635 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 RABGGTBP53611 331 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 FAM117BQ6P1L5 589 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 APBB1IPQ7Z5R6 666 aaPredicted RBP16.65■□□□□ 0.26
SNX13-205ENST00000471744 ECHDC2Q86YB7 292 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 CRIPAKQ8N1N5 446 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 MYCT1Q8N699 235 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 CNNM3Q8NE01 707 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 CCDC34Q96HJ3 373 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 SLC28A3Q9HAS3 691 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 FAM105AQ9NUU6 356 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 HPSEQ9Y251 543 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 ADGRA3Q8IWK6 1321 aa16.65■□□□□ 0.26
SNX13-205ENST00000471744 A0A1B0GVL5 298 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 N4BP3O15049 544 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 TRAK2O60296 914 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 ZNF623O75123 536 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 SLFN14P0C7P3 912 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 MAPTP10636 758 aaKnown RBP16.64■□□□□ 0.25
SNX13-205ENST00000471744 ARF4P18085 180 aaPredicted RBP16.64■□□□□ 0.25
SNX13-205ENST00000471744 NCKAP1LP55160 1127 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 STRN3Q13033 797 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 PRPF4BQ13523 1007 aaKnown RBP16.64■□□□□ 0.25
SNX13-205ENST00000471744 TMEM132AQ24JP5 1023 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 CNNM4Q6P4Q7 775 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 DYMQ7RTS9 669 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 CCDC65Q8IXS2 484 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 FSIP1Q8NA03 581 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 DNAJC19Q96DA6 116 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 PGBD4Q96DM1 585 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 LRCH3Q96II8 777 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 KIFC3Q9BVG8 833 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 ZHX3Q9H4I2 956 aa16.64■□□□□ 0.25
SNX13-205ENST00000471744 RALGAPA2Q2PPJ7 1873 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 A0A1B0GUA9 196 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 SLC16A4O15374 487 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 DGKIO75912 1065 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 PBX2P40425 430 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 SLC27A1Q6PCB7 646 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 TMCO2Q7Z6W1 182 aaPredicted RBP16.63■□□□□ 0.25
SNX13-205ENST00000471744 FAM178BQ8IXR5 827 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 CMTR2Q8IYT2 770 aaKnown RBP16.63■□□□□ 0.25
SNX13-205ENST00000471744 HACE1Q8IYU2 909 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 TMEM161BQ8NDZ6 487 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 SP7Q8TDD2 431 aaPredicted RBP16.63■□□□□ 0.25
SNX13-205ENST00000471744 ADPGKQ9BRR6 497 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 MRPL4Q9BYD3 311 aaKnown RBP16.63■□□□□ 0.25
SNX13-205ENST00000471744 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 TRIM6Q9C030 488 aaPredicted RBP16.63■□□□□ 0.25
SNX13-205ENST00000471744 NKX2-4Q9H2Z4 354 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 YBX2Q9Y2T7 364 aaKnown RBP16.63■□□□□ 0.25
SNX13-205ENST00000471744 NLRC5Q86WI3 1866 aa16.63■□□□□ 0.25
SNX13-205ENST00000471744 FRMD3A2A2Y4 597 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 K7ENM7 598 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 B4GALT5O43286 388 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 MYL1P05976 194 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 CA3P07451 260 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 IDEP14735 1019 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 LIG1P18858 919 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 NDUFA8P51970 172 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 PPP2R2DQ66LE6 453 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 HAUS6Q7Z4H7 955 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 ZNF598Q86UK7 904 aaKnown RBP16.62■□□□□ 0.25
SNX13-205ENST00000471744 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 ZNF689Q96CS4 500 aaPredicted RBP16.62■□□□□ 0.25
SNX13-205ENST00000471744 CPB2Q96IY4 423 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 ST6GALNAC4Q9H4F1 302 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 RC3H2Q9HBD1 1191 aaKnown RBP16.62■□□□□ 0.25
SNX13-205ENST00000471744 OLFML3Q9NRN5 406 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 PANK4Q9NVE7 773 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 PCDHB2Q9Y5E7 798 aa16.62■□□□□ 0.25
SNX13-205ENST00000471744 LAMA3Q16787 3333 aa16.61■□□□□ 0.25
SNX13-205ENST00000471744 ACTN4O43707 911 aaKnown RBP16.61■□□□□ 0.25
SNX13-205ENST00000471744 IBSPP21815 317 aaPredicted RBP16.61■□□□□ 0.25
SNX13-205ENST00000471744 ASIC1P78348 528 aa16.61■□□□□ 0.25
SNX13-205ENST00000471744 ALCAMQ13740 583 aa16.61■□□□□ 0.25
SNX13-205ENST00000471744 DCAF4L1Q3SXM0 396 aa16.61■□□□□ 0.25
SNX13-205ENST00000471744 UBXN11Q5T124 520 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms