RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 RGS17Q9UGC6 210 aaPredicted RBP11.51□□□□□ -0.57
APLF-204ENST00000471727 TBX20Q9UMR3 447 aa11.51□□□□□ -0.57
APLF-204ENST00000471727 COQ4Q9Y3A0 265 aa11.51□□□□□ -0.57
APLF-204ENST00000471727 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
APLF-204ENST00000471727 AGPSO00116 658 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 NFKBIEO00221 500 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 FOXN3O00409 490 aaPredicted RBP11.5□□□□□ -0.57
APLF-204ENST00000471727 RTN2O75298 545 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 GLI1P08151 1106 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 ZBTB48P10074 688 aaPredicted RBP11.5□□□□□ -0.57
APLF-204ENST00000471727 HSPA6P17066 643 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 CAPN2P17655 700 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 PTPRAP18433 802 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 GARTP22102 1010 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 GMPSP49915 693 aaPredicted RBP11.5□□□□□ -0.57
APLF-204ENST00000471727 GUCY2DQ02846 1103 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 PLS1Q14651 629 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 ARHGAP44Q17R89 818 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 KRT39Q6A163 491 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 ENOSF1Q7L5Y1 443 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 CD302Q8IX05 232 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 METTL13Q8N6R0 699 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 TMEM161BQ8NDZ6 487 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 REPS2Q8NFH8 660 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 FBXL18Q96ME1 805 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 CBWD1Q9BRT8 395 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 CARD9Q9H257 536 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 IKZF4Q9H2S9 585 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 PCIF1Q9H4Z3 704 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 TAF1DQ9H5J8 278 aaPredicted RBP11.5□□□□□ -0.57
APLF-204ENST00000471727 TMEM8AQ9HCN3 771 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 KMT5AQ9NQR1 393 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 SMARCAL1Q9NZC9 954 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 EHD2Q9NZN4 543 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 SMCHD1A6NHR9 2005 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 MYH10P35580 1976 aa11.5□□□□□ -0.57
APLF-204ENST00000471727 GOLGA6CA6NDK9 693 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 BHMG1C9JSJ3 638 aaPredicted RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 KRIT1O00522 736 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 SLC16A4O15374 487 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 ATP9AO75110 1047 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 ZC3H11AO75152 810 aaKnown RBP eCLIP11.49□□□□□ -0.57
APLF-204ENST00000471727 MTA2O94776 668 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 CCNE2O96020 404 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 GOLGA6DP0CG33 693 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 CNGA1P29973 690 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 GPC3P51654 580 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 GPC5P78333 572 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 PPP3CAQ08209 521 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 BRDTQ58F21 947 aaPredicted RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 NOL9Q5SY16 702 aaKnown RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 CFAP58Q5T655 872 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 NBPF12Q5TAG4 269 aaPredicted RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 C11orf63Q6NUN7 778 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 FAM71AQ8IYT1 594 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 OLIG1Q8TAK6 271 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 LRRC45Q96CN5 670 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 IFT74Q96LB3 600 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 MFSD14AQ96MC6 490 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 RPS6KC1Q96S38 1066 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 TEX13BQ9BXU2 312 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 TMEM117Q9H0C3 514 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 GOLGA6AQ9NYA3 693 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 TMOD4Q9NZQ9 345 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 PACSIN2Q9UNF0 486 aaPredicted RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 GOLGA6L10A0A0M3HER8 536 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 ERICH4A6NGS2 130 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 CCDC169A6NNP5 214 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 RAD51CO43502 376 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 BUB1BO60566 1050 aaPredicted RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 PHACTR2O75167 634 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 GGPS1O95749 300 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 NPTX2P47972 431 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 GCLMP48507 274 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 CARSP49589 748 aaKnown RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 DNA2P51530 1060 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 SNRNP35Q16560 246 aaKnown RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 ZSCAN26Q16670 478 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 UGCGQ16739 394 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 C1orf220Q5T0J3 134 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 SNRNP48Q6IEG0 339 aaKnown RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 MIS18BP1Q6P0N0 1132 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 LRIG3Q6UXM1 1119 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 CATSPERGQ6ZRH7 1159 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 ANO5Q75V66 913 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 GSPT2Q8IYD1 628 aaKnown RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 UBL4BQ8N7F7 174 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 PARD3BQ8TEW8 1205 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 CEP170P1Q96L14 293 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 MTFR1LQ9H019 292 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 FAM114A2Q9NRY5 505 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 NOC2LQ9Y3T9 749 aaKnown RBP11.49□□□□□ -0.57
APLF-204ENST00000471727 CD2APQ9Y5K6 639 aa11.49□□□□□ -0.57
APLF-204ENST00000471727 DENND3A2RUS2 1198 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 SART1O43290 800 aaKnown RBP11.48□□□□□ -0.57
APLF-204ENST00000471727 KCNA2P16389 499 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms