RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TEPPQ6URK8 271 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 GPR155Q7Z3F1 870 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 PROSER1Q86XN7 944 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 STK11IPQ8N1F8 1099 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 RAB24Q969Q5 203 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 APIPQ96GX9 242 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 CERS4Q9HA82 394 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 GALNT8Q9NY28 637 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 SLC5A6Q9Y289 635 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 LRCH1Q9Y2L9 728 aa8.13□□□□□ -1.11
SMC5-202ENST00000471372 HPXP02790 462 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 PPM1AP35813 382 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 GPR15P49685 360 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 GPSM2P81274 684 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 MGAT2Q10469 447 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 SEPT2Q15019 361 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 DGKKQ5KSL6 1271 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 SPTY2D1Q68D10 685 aaPredicted RBP8.12□□□□□ -1.11
SMC5-202ENST00000471372 FAM126BQ8IXS8 530 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 DRC7Q8IY82 874 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 NSUN6Q8TEA1 469 aaKnown RBP8.12□□□□□ -1.11
SMC5-202ENST00000471372 BTBD1Q9H0C5 482 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 C14orf93Q9H972 538 aaKnown RBP8.12□□□□□ -1.11
SMC5-202ENST00000471372 RBM12Q9NTZ6 932 aaKnown RBP8.12□□□□□ -1.11
SMC5-202ENST00000471372 TPCN1Q9ULQ1 816 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 WASF3Q9UPY6 502 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 SNX13Q9Y5W8 968 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 DGKBQ9Y6T7 804 aa8.12□□□□□ -1.11
SMC5-202ENST00000471372 LRRC10BA6NIK2 292 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 NUDT19A8MXV4 375 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 ENO2P09104 434 aaPredicted RBP8.11□□□□□ -1.11
SMC5-202ENST00000471372 APEX1P27695 318 aaKnown RBP8.11□□□□□ -1.11
SMC5-202ENST00000471372 CHKAP35790 457 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 PRR5P85299 388 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 ZNF543Q08ER8 600 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 BIRC3Q13489 604 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 ALFQ53S48 1182 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 FAM209BQ5JX69 171 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 LIPIQ6XZB0 460 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 TTC7BQ86TV6 843 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 MIB1Q86YT6 1006 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 RHOT1Q8IXI2 618 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 C7orf25Q9BPX7 421 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 LRRC27Q9C0I9 530 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 HSPBP1Q9NZL4 362 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 ANAPC4Q9UJX5 808 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 GTF2A1LQ9UNN4 478 aa8.11□□□□□ -1.11
SMC5-202ENST00000471372 A0A0A6YYK5 440 aaPredicted RBP8.1□□□□□ -1.11
SMC5-202ENST00000471372 SEC24DO94855 1032 aaPredicted RBP8.1□□□□□ -1.11
SMC5-202ENST00000471372 HK3P52790 923 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 TNFAIP2Q03169 654 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 MGAT5Q09328 741 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 LMOD3Q0VAK6 560 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 NOGQ13253 232 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 CR1LQ2VPA4 569 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 CCDC178Q5BJE1 867 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 PRSS36Q5K4E3 855 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 THEMIS2Q5TEJ8 643 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 IZUMO3Q5VZ72 239 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 CLEC4GQ6UXB4 293 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 IL31RAQ8NI17 732 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 TSPAN17Q96FV3 270 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 SLC35A4Q96G79 324 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 HIST1H2AHQ96KK5 128 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 DMRTA2Q96SC8 542 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 HIST1H2AJQ99878 128 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 PTPN18Q99952 460 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 SOX7Q9BT81 388 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 OR10A5Q9H207 317 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 KCMF1Q9P0J7 381 aa8.1□□□□□ -1.11
SMC5-202ENST00000471372 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.1□□□□□ -1.11
SMC5-202ENST00000471372 USP19O94966 1318 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 SLC16A6O15403 523 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 FRS3O43559 492 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 XPAP23025 273 aaPredicted RBP8.09□□□□□ -1.11
SMC5-202ENST00000471372 STT3AP46977 705 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 NKX6-1P78426 367 aaPredicted RBP8.09□□□□□ -1.11
SMC5-202ENST00000471372 FGL2Q14314 439 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 ELF2Q15723 593 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 PDCD2Q16342 344 aaPredicted RBP8.09□□□□□ -1.11
SMC5-202ENST00000471372 PPP4R3AQ6IN85 833 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 TMC5Q6UXY8 1006 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 RPTNQ6XPR3 784 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 LDHAL6AQ6ZMR3 332 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 SLC51AQ86UW1 340 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 LIX1LQ8IVB5 337 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 GLB1L2Q8IW92 636 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 IGDCC4Q8TDY8 1250 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 CCT6BQ92526 530 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 BTBD2Q9BX70 525 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 SAGE1Q9NXZ1 904 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 C9orf78Q9NZ63 289 aaPredicted RBP8.09□□□□□ -1.11
SMC5-202ENST00000471372 MAGEL2Q9UJ55 1249 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 PCDHA3Q9Y5H8 950 aa8.09□□□□□ -1.11
SMC5-202ENST00000471372 POM121BA6NF01 834 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 H3BUI4 141 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 MAFGO15525 162 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 TMEM127O75204 238 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 CENPBP07199 599 aaPredicted RBP8.08□□□□□ -1.12
SMC5-202ENST00000471372 ANTXR2P58335 489 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms