RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	MTF1	Q14872	753 aa		28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	CDCA2	Q69YH5	1023 aa	Predicted RBP	28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	FBXL18	Q96ME1	805 aa		28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	ARHGAP39	Q9C0H5	1083 aa		28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	GAN	Q9H2C0	597 aa		28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	ZNHIT6	Q9NWK9	470 aa	Known RBP	28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250		Q9Y3F1	56 aa		28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	ZSWIM8	A7E2V4	1837 aa		28.31	■■■□□ 2.12
U2AF1-208	ENST00000471250	ASAP2	O43150	1006 aa		28.3	■■■□□ 2.12
U2AF1-208	ENST00000471250	VAMP7	P51809	220 aa		28.3	■■■□□ 2.12
U2AF1-208	ENST00000471250	TOGARAM2	Q6ZUX3	1019 aa		28.3	■■■□□ 2.12
U2AF1-208	ENST00000471250	TLK2	Q86UE8	772 aa		28.3	■■■□□ 2.12
U2AF1-208	ENST00000471250	PPP1R13B	Q96KQ4	1090 aa		28.3	■■■□□ 2.12
U2AF1-208	ENST00000471250	GOLGA8IP	A6NC78	632 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	GOLGA8J	A6NMD2	632 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	TRIM49	P0CI25	452 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	TRIM49C	P0CI26	452 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	SLC9A1	P19634	815 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	KLRC1	P26715	233 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	PON1	P27169	355 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	IGBP1	P78318	339 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	CACNA2D4	Q7Z3S7	1137 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	LINC01465	Q8N7H1	131 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	SAAL1	Q96ER3	474 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	CHP1	Q99653	195 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	PPP2R2C	Q9Y2T4	447 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	ZSCAN12	O43309	604 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	ADRB2	P07550	413 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	CDK17	Q00537	523 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	SNRNP35	Q16560	246 aa	Known RBP	28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	PDXDC1	Q6P996	788 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	CCDC113	Q9H0I3	377 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	C2orf40	Q9H1Z8	148 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	PLAGL2	Q9UPG8	496 aa		28.29	■■■□□ 2.12
U2AF1-208	ENST00000471250	KIAA0391	O15091	583 aa	Known RBP	28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	APLP1	P51693	650 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	CLCN3	P51790	818 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	TFDP1	Q14186	410 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	SLFN12L	Q6IEE8	588 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	RRAGA	Q7L523	313 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	RHPN2	Q8IUC4	686 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	CBWD2	Q8IUF1	395 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	ZBTB8OS	Q8IWT0	167 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	GPD1L	Q8N335	351 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	METTL13	Q8N6R0	699 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	RNF149	Q8NC42	400 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	GABRQ	Q9UN88	632 aa		28.28	■■■□□ 2.12
U2AF1-208	ENST00000471250	SRGAP2C	P0DJJ0	459 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	POLR2F	P61218	127 aa	Known RBP	28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	DLG4	P78352	724 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	CBWD6	Q4V339	395 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	CBWD3	Q5JTY5	395 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	CBWD5	Q5RIA9	395 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	KLHDC7A	Q5VTJ3	777 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	REXO1L1P	Q8IX06	675 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	PLEKHO2	Q8TD55	490 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	ZBTB10	Q96DT7	871 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	MFSD14A	Q96MC6	490 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	NUCKS1	Q9H1E3	243 aa	Known RBP	28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	GCNT4	Q9P109	453 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	EVPL	Q92817	2033 aa		28.27	■■■□□ 2.12
U2AF1-208	ENST00000471250	LRRC53	A6NM62	1247 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	ACTN1	P12814	892 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	APBA1	Q02410	837 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	ENPEP	Q07075	957 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	C1orf220	Q5T0J3	134 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	MTHFD1L	Q6UB35	978 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	NYAP1	Q6ZVC0	841 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	TARS2	Q9BW92	718 aa	Known RBP	28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	KIAA1586	Q9HCI6	787 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	SIX2	Q9NPC8	291 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	ADGRG1	Q9Y653	693 aa		28.26	■■■□□ 2.12
U2AF1-208	ENST00000471250	N4BP1	O75113	896 aa	Known RBP	28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	EDN1	P05305	212 aa		28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	MYL7	Q01449	175 aa		28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	PPFIA1	Q13136	1202 aa		28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	GRIK4	Q16099	956 aa		28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	DNTTIP2	Q5QJE6	756 aa	Known RBP	28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	TMC2	Q8TDI7	906 aa		28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	LENG1	Q96BZ8	264 aa	Predicted RBP	28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	AP5M1	Q9H0R1	490 aa		28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	NLRC4	Q9NPP4	1024 aa		28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	FBXL5	Q9UKA1	691 aa		28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	USP20	Q9Y2K6	914 aa		28.26	■■■□□ 2.11
U2AF1-208	ENST00000471250	P4HA2	O15460	535 aa		28.25	■■■□□ 2.11
U2AF1-208	ENST00000471250	MSC	O60682	206 aa		28.25	■■■□□ 2.11
U2AF1-208	ENST00000471250	TBC1D8	O95759	1140 aa		28.25	■■■□□ 2.11
U2AF1-208	ENST00000471250	POU5F1B	Q06416	359 aa		28.25	■■■□□ 2.11
U2AF1-208	ENST00000471250	ZPBP2	Q6X784	338 aa		28.25	■■■□□ 2.11
U2AF1-208	ENST00000471250	SYN2	Q92777	582 aa	Predicted RBP	28.25	■■■□□ 2.11
U2AF1-208	ENST00000471250	C16orf45	Q96MC5	204 aa	Predicted RBP	28.25	■■■□□ 2.11
U2AF1-208	ENST00000471250	DESI2	Q9BSY9	194 aa		28.25	■■■□□ 2.11
U2AF1-208	ENST00000471250	CFHR5	Q9BXR6	569 aa		28.25	■■■□□ 2.11
U2AF1-208	ENST00000471250	PMM2	O15305	246 aa		28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	EXTL3	O43909	919 aa		28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	F2	P00734	622 aa		28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	CCDC175	P0C221	793 aa		28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	AKR1A1	P14550	325 aa		28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	FLT3LG	P49771	235 aa		28.24	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms