RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 SPOUT1Q5T280 376 aaKnown RBP15.64■□□□□ 0.09
TOP3B-215ENST00000470338 AGMOQ6ZNB7 445 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 ZBTB8OSQ8IWT0 167 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 DAW1Q8N136 415 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 SMG8Q8ND04 991 aaKnown RBP15.64■□□□□ 0.09
TOP3B-215ENST00000470338 ATXN2LQ8WWM7 1075 aaKnown RBP15.64■□□□□ 0.09
TOP3B-215ENST00000470338 CDK5RAP3Q96JB5 506 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 IFT74Q96LB3 600 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 PLIN2Q99541 437 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 RUSC1Q9BVN2 902 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 TIPINQ9BVW5 301 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 MRPL9Q9BYD2 267 aaKnown RBP15.64■□□□□ 0.09
TOP3B-215ENST00000470338 CCDC113Q9H0I3 377 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 PRMT7Q9NVM4 692 aaPredicted RBP15.64■□□□□ 0.09
TOP3B-215ENST00000470338 THEGQ9P2T0 379 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 SRPRBQ9Y5M8 271 aaKnown RBP15.64■□□□□ 0.09
TOP3B-215ENST00000470338 B4GALT5O43286 388 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 HIP1RO75146 1068 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
TOP3B-215ENST00000470338 GUCY2CP25092 1073 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 DNAJB1P25685 340 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 SLC12A3P55017 1021 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 MAPK7Q13164 816 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 SLC39A14Q15043 492 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 SKIV2LQ15477 1246 aaKnown RBP15.63■□□□□ 0.09
TOP3B-215ENST00000470338 LONRF3Q496Y0 759 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 GLB1LQ6UWU2 654 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 CALML4Q96GE6 196 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 USP28Q96RU2 1077 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 EIF2AQ9BY44 585 aaKnown RBP15.63■□□□□ 0.09
TOP3B-215ENST00000470338 CCSER1Q9C0I3 900 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 NSUN3Q9H649 340 aaKnown RBP15.63■□□□□ 0.09
TOP3B-215ENST00000470338 KCND2Q9NZV8 630 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 FBXO2Q9UK22 296 aaPredicted RBP15.63■□□□□ 0.09
TOP3B-215ENST00000470338 COG5Q9UP83 839 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 IPPQ9Y573 584 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 CNTNAP2Q9UHC6 1331 aa15.63■□□□□ 0.09
TOP3B-215ENST00000470338 ACKR2O00590 384 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 FGF18O76093 207 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 PLA2G4BP0C869 781 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 MARCKSP29966 332 aaPredicted RBP15.62■□□□□ 0.09
TOP3B-215ENST00000470338 EFNA5P52803 228 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 PLCB3Q01970 1234 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 CEBPZQ03701 1054 aaKnown RBP15.62■□□□□ 0.09
TOP3B-215ENST00000470338 UBE3AQ05086 875 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 MAPK6Q16659 721 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 NOMO2Q5JPE7 1267 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 SLC27A1Q6PCB7 646 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 KCNT2Q6UVM3 1135 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 DEPTORQ8TB45 409 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 LRRC15Q8TF66 581 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 POF1BQ8WVV4 589 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 DRC1Q96MC2 740 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 RSAD1Q9HA92 442 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 C17orf75Q9HAS0 396 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 UBN1Q9NPG3 1134 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 TBC1D13Q9NVG8 400 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 TRIP11Q15643 1979 aa15.62■□□□□ 0.09
TOP3B-215ENST00000470338 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.61■□□□□ 0.09
TOP3B-215ENST00000470338 TTLL13PA6NNM8 815 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 INPPL1O15357 1258 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 PRKCBP05771 671 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 ITGA4P13612 1032 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 NPTX2P47972 431 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 NASPP49321 788 aaPredicted RBP15.61■□□□□ 0.09
TOP3B-215ENST00000470338 PEX3P56589 373 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 MRPS5P82675 430 aaKnown RBP15.61■□□□□ 0.09
TOP3B-215ENST00000470338 COL19A1Q14993 1142 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 ARSHQ5FYA8 562 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 TCEAL5Q5H9L2 206 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 THNSL1Q8IYQ7 743 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 HLA-CQ95604 372 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 EPSTI1Q96J88 318 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 ZNF558Q96NG5 402 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 ASB2Q96Q27 587 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 NTPCRQ9BSD7 190 aaKnown RBP15.61■□□□□ 0.09
TOP3B-215ENST00000470338 KIFC3Q9BVG8 833 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 BLOC1S4Q9NUP1 217 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 KANSL3Q9P2N6 904 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 DAXXQ9UER7 740 aaPredicted RBP15.61■□□□□ 0.09
TOP3B-215ENST00000470338 LZTS1Q9Y250 596 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 VCANP13611 3396 aa15.61■□□□□ 0.09
TOP3B-215ENST00000470338 TCF20Q9UGU0 1960 aaKnown RBP15.6■□□□□ 0.09
TOP3B-215ENST00000470338 EDN1P05305 212 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 SSBP05455 408 aaKnown RBP eCLIP15.6■□□□□ 0.09
TOP3B-215ENST00000470338 ZSCAN22P10073 491 aaPredicted RBP15.6■□□□□ 0.09
TOP3B-215ENST00000470338 PLCG1P19174 1290 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 PPM1AP35813 382 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 AFF1P51825 1210 aaKnown RBP15.6■□□□□ 0.09
TOP3B-215ENST00000470338 BCAR1P56945 870 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 PRPF4BQ13523 1007 aaKnown RBP15.6■□□□□ 0.09
TOP3B-215ENST00000470338 KARSQ15046 597 aaKnown RBP15.6■□□□□ 0.09
TOP3B-215ENST00000470338 USP49Q70CQ1 688 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 CDR2LQ86X02 465 aaPredicted RBP15.6■□□□□ 0.09
TOP3B-215ENST00000470338 SLC39A11Q8N1S5 342 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 MRPS27Q92552 414 aaKnown RBP15.6■□□□□ 0.09
TOP3B-215ENST00000470338 CLIC6Q96NY7 704 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 PDZD7Q9H5P4 517 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 TMEM134Q9H6X4 195 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms