RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 EEPD1Q7L9B9 569 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 DPP9Q86TI2 863 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 NT5DC4Q86YG4 428 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ETNPPLQ8TBG4 499 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 MORC4Q8TE76 937 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 PLD4Q96BZ4 506 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 PKNOX2Q96KN3 472 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 SPATA32Q96LK8 384 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ZNF396Q96N95 335 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 CLIC6Q96NY7 704 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 INPP4AQ96PE3 977 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 MXRA8Q9BRK3 442 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 NOC4LQ9BVI4 516 aaKnown RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 KATNBL1Q9H079 304 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 KCNMB3Q9NPA1 279 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 DDX25Q9UHL0 483 aaKnown RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 FBXO2Q9UK22 296 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 CFAP45Q9UL16 551 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 PCDHA7Q9UN72 937 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 TELO2Q9Y4R8 837 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 SPTLC2O15270 562 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 MSH4O15457 936 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 CPB1P15086 417 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 CCND2P30279 289 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ATP11AP98196 1134 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 SP2Q02086 613 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ITGB3BPQ13352 177 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 STK38Q15208 465 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 Q4G0T1 1027 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 RPS26P11Q5JNZ5 115 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 SPECC1Q5M775 1068 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 MAMDC4Q6UXC1 1216 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 DTHD1Q6ZMT9 781 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 USP49Q70CQ1 688 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ARMCX2Q7L311 632 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 HS2ST1Q7LGA3 356 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 PLA2G4DQ86XP0 818 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 FBXO16Q8IX29 292 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 JMYQ8N9B5 988 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 GPT2Q8TD30 523 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 HHIPQ96QV1 700 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 IWS1Q96ST2 819 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 POP1Q99575 1024 aaKnown RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 SCAND2PQ9GZW5 306 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 JADE2Q9NQC1 790 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 PDGFCQ9NRA1 345 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 KCNH7Q9NS40 1196 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 LMBRD1Q9NUN5 540 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 ADD3Q9UEY8 706 aaKnown RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 NAGPAQ9UK23 515 aa5.33□□□□□ -1.56
SF3B1-208ENST00000470268 DIS3Q9Y2L1 958 aaKnown RBP5.33□□□□□ -1.56
SF3B1-208ENST00000470268 A0A096LPE4 126 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 A0A0A0MRY4 1105 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 A0A1W2PPZ6 126 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 PP2D1A8MPX8 630 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 DHX15O43143 795 aaKnown RBP5.32□□□□□ -1.56
SF3B1-208ENST00000470268 ADCY6O43306 1168 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 FKTNO75072 461 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 PPP6R2O75170 966 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 EIF3JO75822 258 aaKnown RBP5.32□□□□□ -1.56
SF3B1-208ENST00000470268 ARIH2O95376 493 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 GCFC2P16383 781 aaKnown RBP5.32□□□□□ -1.56
SF3B1-208ENST00000470268 CDC25AP30304 524 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 CYP2C19P33261 490 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 TXKP42681 527 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 SPIRE1Q08AE8 756 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 RAD51AP2Q09MP3 1159 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 MTMR1Q13613 665 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 STXBP2Q15833 593 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 PERM1Q5SV97 790 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 PRAMEF19Q5SWL8 479 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 TAPT1Q6NXT6 567 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 ELMSAN1Q6PJG2 1045 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 SHC4Q6S5L8 630 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 GAS2L3Q86XJ1 694 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 SOCS4Q8WXH5 440 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 TRIB2Q92519 343 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 GBP4Q96PP9 640 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 APBA2Q99767 749 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 TINF2Q9BSI4 451 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 TGIF2Q9GZN2 237 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 EHMT1Q9H9B1 1298 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 AGO4Q9HCK5 861 aaKnown RBP5.32□□□□□ -1.56
SF3B1-208ENST00000470268 SRRDQ9UH36 339 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 SRPRBQ9Y5M8 271 aaKnown RBP5.32□□□□□ -1.56
SF3B1-208ENST00000470268 MORC2Q9Y6X9 1032 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-208ENST00000470268 ELP1O95163 1332 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 RBBP6Q7Z6E9 1792 aaKnown RBP5.32□□□□□ -1.56
SF3B1-208ENST00000470268 PLXNB2O15031 1838 aa5.32□□□□□ -1.56
SF3B1-208ENST00000470268 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-208ENST00000470268 VWA3AA6NCI4 1184 aa5.31□□□□□ -1.56
SF3B1-208ENST00000470268 ASB14A6NK59 587 aa5.31□□□□□ -1.56
SF3B1-208ENST00000470268 IPO5O00410 1097 aaKnown RBP5.31□□□□□ -1.56
SF3B1-208ENST00000470268 HYAL3O43820 417 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-208ENST00000470268 PSMD10O75832 226 aa5.31□□□□□ -1.56
SF3B1-208ENST00000470268 OR52Z1P0C646 297 aa5.31□□□□□ -1.56
SF3B1-208ENST00000470268 KCNA2P16389 499 aa5.31□□□□□ -1.56
SF3B1-208ENST00000470268 PRPHP41219 470 aa5.31□□□□□ -1.56
SF3B1-208ENST00000470268 RGS2P41220 211 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms