RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ECE1P42892 770 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 SNRPFP62306 86 aaKnown RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 PSMC6P62333 389 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 ZYXQ15942 572 aaKnown RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 PPP2R5EQ16537 467 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 MEI1Q5TIA1 1274 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 ALKBH5Q6P6C2 394 aaKnown RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 C1orf186Q6ZWK4 172 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 SND1Q7KZF4 910 aaKnown RBP eCLIP8.69□□□□□ -1.026e-9■■■■■ 32.8
SMC4-212ENST00000470240 LDHDQ86WU2 507 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 MEIOBQ8N635 442 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 ANKRD13CQ8N6S4 541 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 PRPF38AQ8NAV1 312 aaKnown RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 FAM76AQ8TAV0 307 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 WHAMMQ8TF30 809 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 CTNNBL1Q8WYA6 563 aaPredicted RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 ACCSQ96QU6 501 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 NAP1L3Q99457 506 aaPredicted RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 HSD17B14Q9BPX1 270 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 MXRA8Q9BRK3 442 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 LXNQ9BS40 222 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 TBC1D22BQ9NU19 505 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 RGL1Q9NZL6 768 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 ADAMTS1Q9UHI8 967 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 HPCAL4Q9UM19 191 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 DIS3Q9Y2L1 958 aaKnown RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 FAN1Q9Y2M0 1017 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 SAMM50Q9Y512 469 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 MYH11P35749 1972 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 MYH10P35580 1976 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 A0A087X0T9 212 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 GOLGA6L10A0A0M3HER8 536 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 GOLGA6L10A6NI86 522 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 YDJCA8MPS7 323 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 TMCO5BA8MYB1 307 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 RSPH10B2B2RC85 870 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 CCDC188H7C350 402 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 PGRMC1O00264 195 aaKnown RBP8.68□□□□□ -1.02
SMC4-212ENST00000470240 OPLAHO14841 1288 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 P4HA2O15460 535 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 ZBED4O75132 1171 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 RAD17O75943 681 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 ERLIN2O94905 339 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 FTCDO95954 541 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 TFRCP02786 760 aaKnown RBP8.68□□□□□ -1.02
SMC4-212ENST00000470240 P4HBP07237 508 aaKnown RBP8.68□□□□□ -1.02
SMC4-212ENST00000470240 FAM228BP0C875 321 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 RSPH10BP0C881 870 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 CAPN2P17655 700 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 SLC9A1P19634 815 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 KLRC1P26715 233 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 ABCD1P33897 745 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 SOX5P35711 763 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 FMO5P49326 533 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 CYP2J2P51589 502 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 HSD17B4P51659 736 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 CASP5P51878 434 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 JAK3P52333 1124 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 ZNF131P52739 623 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 NPEPPSP55786 919 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 NR1H3Q13133 447 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 SHROOM1Q2M3G4 852 aaPredicted RBP8.68□□□□□ -1.02
SMC4-212ENST00000470240 MUM1L1Q5H9M0 696 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 INTS8Q75QN2 995 aaKnown RBP8.68□□□□□ -1.02
SMC4-212ENST00000470240 PEX26Q7Z412 305 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 SLC9A9Q8IVB4 645 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 EIF1ADQ8N9N8 165 aaKnown RBP8.68□□□□□ -1.02
SMC4-212ENST00000470240 CCDC26Q8TAB7 109 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 ACER1Q8TDN7 264 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 PIGOQ8TEQ8 1089 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 CAVIN3Q969G5 261 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 SLC35C1Q96A29 364 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 PSMB7Q99436 277 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 WDR18Q9BV38 432 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 TLR10Q9BXR5 811 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 FGFBP2Q9BYJ0 223 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 STK33Q9BYT3 514 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 TSPYL1Q9H0U9 437 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 DEFB129Q9H1M3 183 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 DBR1Q9UK59 544 aaKnown RBP8.68□□□□□ -1.02
SMC4-212ENST00000470240 ZNRF3Q9ULT6 936 aa8.68□□□□□ -1.02
SMC4-212ENST00000470240 GOLGA6CA6NDK9 693 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 LRRIQ3A6PVS8 624 aaPredicted RBP8.67□□□□□ -1.02
SMC4-212ENST00000470240 H0YCG3 227 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 PDE2AO00408 941 aaPredicted RBP8.67□□□□□ -1.02
SMC4-212ENST00000470240 KCNK3O14649 394 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 CLIC2O15247 247 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 NCK2O43639 380 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 TLR2O60603 784 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 HIP1RO75146 1068 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 SLITRK3O94933 977 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 HEXIM1O94992 359 aaKnown RBP8.67□□□□□ -1.02
SMC4-212ENST00000470240 KIF4AO95239 1232 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 GOLGA6DP0CG33 693 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 ACTN1P12814 892 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 TNFAIP3P21580 790 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms