RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, human

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF3C2-209	ENST00000470115	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	ECM1	Q16610	540 aa		18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	AMHR2	Q16671	573 aa		18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	RSPH1	Q8WYR4	309 aa		18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	TCF25	Q9BQ70	676 aa		18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	EIF2A	Q9BY44	585 aa	Known RBP	18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	GBP3	Q9H0R5	595 aa		18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	ENTPD7	Q9NQZ7	604 aa		18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CD207	Q9UJ71	328 aa		18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	FAM50B	Q9Y247	325 aa		18.19	■□□□□ 0.5
GTF3C2-209	ENST00000470115	ARHGEF35	A5YM69	484 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	AXL	P30530	894 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	MCM2	P49736	904 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	AFF1	P51825	1210 aa	Known RBP	18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	PDIA5	Q14554	519 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	HAUS3	Q68CZ6	603 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	NOTUM	Q6P988	496 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	PADI6	Q6TGC4	694 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	TMC7	Q7Z402	723 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	ZNF280B	Q86YH2	543 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	GJD3	Q8N144	294 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	SMG8	Q8ND04	991 aa	Known RBP	18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	MCPH1	Q8NEM0	835 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	MSLNL	Q96KJ4	702 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	NFKBIZ	Q9BYH8	718 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	NRDE2	Q9H7Z3	1164 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	RSAD1	Q9HA92	442 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	NGRN	Q9NPE2	291 aa	Known RBP	18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CLEC1B	Q9P126	229 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	C5orf42	Q9H799	3197 aa		18.18	■□□□□ 0.5
GTF3C2-209	ENST00000470115	LRRIQ4	A6NIV6	560 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	HIDE1	A8MVS5	230 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115		H3BQV1	296 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	B4GALT5	O43286	388 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	MBTPS2	O43462	519 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	GLP2R	O95838	553 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	ARF4	P18085	180 aa	Predicted RBP	18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	NCL	P19338	710 aa	Known RBP	18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	MUT	P22033	750 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	SSTR3	P32745	418 aa	Predicted RBP	18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	RBM10	P98175	930 aa	Known RBP	18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	DUSP6	Q16828	381 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	IGSF22	Q8N9C0	903 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	URGCP	Q8TCY9	931 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CSRNP2	Q9H175	543 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	RNF39	Q9H2S5	420 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	DNAJB4	Q9UDY4	337 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	KIAA1024	Q9UPX6	916 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	SMC3	Q9UQE7	1217 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	IPP	Q9Y573	584 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CNTNAP2	Q9UHC6	1331 aa		18.17	■□□□□ 0.5
GTF3C2-209	ENST00000470115	B4GALT3	O60512	393 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	GALT	P07902	379 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	ITGA4	P13612	1032 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CYP11B2	P19099	503 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	SMAD4	Q13485	552 aa	Known RBP	18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	SMAD2	Q15796	467 aa	Known RBP	18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	IL17A	Q16552	155 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	TMEM173	Q86WV6	379 aa	Predicted RBP	18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CDR2L	Q86X02	465 aa	Predicted RBP	18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CNNM3	Q8NE01	707 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	VN1R2	Q8NFZ6	395 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CCDC51	Q96ER9	411 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	TMEM169	Q96HH4	297 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CDCA3	Q99618	268 aa	Predicted RBP	18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	BACH2	Q9BYV9	841 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	EPHX3	Q9H6B9	360 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	POLD4	Q9HCU8	107 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	HES2	Q9Y543	173 aa		18.16	■□□□□ 0.5
GTF3C2-209	ENST00000470115	PP2D1	A8MPX8	630 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	LAD1	O00515	517 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	DDHD2	O94830	711 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	EYA4	O95677	639 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	PRPH	P41219	470 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	SLC11A1	P49279	550 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	RILPL1	Q5EBL4	403 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	DTHD1	Q6ZMT9	781 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	MRPL43	Q8N983	215 aa	Known RBP	18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	SNX29	Q8TEQ0	813 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	BCL7C	Q8WUZ0	217 aa	Predicted RBP	18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	BSND	Q8WZ55	320 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	IGSF21	Q96ID5	467 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	RAB34	Q9BZG1	259 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	BHMT2	Q9H2M3	363 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	UBN1	Q9NPG3	1134 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	DDX19A	Q9NUU7	478 aa	Known RBP	18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	KANSL3	Q9P2N6	904 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	PRKAG3	Q9UGI9	489 aa		18.15	■□□□□ 0.5
GTF3C2-209	ENST00000470115	CXCL14	O95715	111 aa		18.14	■□□□□ 0.49
GTF3C2-209	ENST00000470115	POMC	P01189	267 aa		18.14	■□□□□ 0.49
GTF3C2-209	ENST00000470115	CDC25A	P30304	524 aa		18.14	■□□□□ 0.49
GTF3C2-209	ENST00000470115	ZP2	Q05996	745 aa		18.14	■□□□□ 0.49
GTF3C2-209	ENST00000470115	COASY	Q13057	564 aa		18.14	■□□□□ 0.49
GTF3C2-209	ENST00000470115	SMC1A	Q14683	1233 aa	Known RBP	18.14	■□□□□ 0.49
GTF3C2-209	ENST00000470115	LARP1B	Q659C4	914 aa	Known RBP	18.14	■□□□□ 0.49
GTF3C2-209	ENST00000470115	CDCA2	Q69YH5	1023 aa	Predicted RBP	18.14	■□□□□ 0.49
GTF3C2-209	ENST00000470115	LLGL2	Q6P1M3	1020 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms