RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TULP1O00294 542 aaPredicted RBP19.77■□□□□ 0.75
SMC4-211ENST00000469858 MAPK13O15264 365 aa19.77■□□□□ 0.75
SMC4-211ENST00000469858 CA12O43570 354 aa19.77■□□□□ 0.75
SMC4-211ENST00000469858 NDUFA10O95299 355 aa19.77■□□□□ 0.75
SMC4-211ENST00000469858 MMP3P08254 477 aa19.77■□□□□ 0.75
SMC4-211ENST00000469858 SCP2P22307 547 aa19.77■□□□□ 0.75
SMC4-211ENST00000469858 HNRNPH3P31942 346 aaKnown RBP19.77■□□□□ 0.75
SMC4-211ENST00000469858 MYL7Q01449 175 aa19.77■□□□□ 0.75
SMC4-211ENST00000469858 SOCS4Q8WXH5 440 aa19.77■□□□□ 0.75
SMC4-211ENST00000469858 C16orf70Q9BSU1 422 aa19.77■□□□□ 0.75
SMC4-211ENST00000469858 ZNF215Q9UL58 517 aaPredicted RBP19.77■□□□□ 0.75
SMC4-211ENST00000469858 EPN1Q9Y6I3 576 aaPredicted RBP19.77■□□□□ 0.75
SMC4-211ENST00000469858 GOLGA6L9A6NEM1 432 aa19.76■□□□□ 0.75
SMC4-211ENST00000469858 ADCY3O60266 1144 aa19.76■□□□□ 0.75
SMC4-211ENST00000469858 INSRRP14616 1297 aa19.76■□□□□ 0.75
SMC4-211ENST00000469858 LAMTOR4Q0VGL1 99 aa19.76■□□□□ 0.75
SMC4-211ENST00000469858 MXD4Q14582 209 aaPredicted RBP19.76■□□□□ 0.75
SMC4-211ENST00000469858 METTL13Q8N6R0 699 aa19.76■□□□□ 0.75
SMC4-211ENST00000469858 KCNN1Q92952 543 aa19.76■□□□□ 0.75
SMC4-211ENST00000469858 APBA2Q99767 749 aa19.76■□□□□ 0.75
SMC4-211ENST00000469858 NHEJ1Q9H9Q4 299 aaPredicted RBP19.76■□□□□ 0.75
SMC4-211ENST00000469858 PHLPP2Q6ZVD8 1323 aa19.76■□□□□ 0.75
SMC4-211ENST00000469858 KAT6AQ92794 2004 aa19.76■□□□□ 0.75
SMC4-211ENST00000469858 SRGAP2CP0DJJ0 459 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 GARTP22102 1010 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 CDK17Q00537 523 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 KLHDC7AQ5VTJ3 777 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 DPY19L2P1Q6NXN4 242 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 EFCAB12Q6NXP0 572 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 RNF149Q8NC42 400 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 PLEKHO2Q8TD55 490 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 SUCLA2Q9P2R7 463 aaPredicted RBP19.75■□□□□ 0.75
SMC4-211ENST00000469858 GJD2Q9UKL4 321 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 H3BRB1 525 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 KIF2AO00139 706 aaPredicted RBP19.75■□□□□ 0.75
SMC4-211ENST00000469858 PLEKP08567 350 aaPredicted RBP19.75■□□□□ 0.75
SMC4-211ENST00000469858 UCHL3P15374 230 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 CTGFP29279 349 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 CLCN3P51790 818 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 DGKDQ16760 1214 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 ZNF484Q5JVG2 852 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 TRIM65Q6PJ69 517 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 RHPN2Q8IUC4 686 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 GPD1LQ8N335 351 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 NUCKS1Q9H1E3 243 aaKnown RBP19.75■□□□□ 0.75
SMC4-211ENST00000469858 TUT1Q9H6E5 874 aaKnown RBP19.75■□□□□ 0.75
SMC4-211ENST00000469858 TMEM134Q9H6X4 195 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 SIX2Q9NPC8 291 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 FHOD1Q9Y613 1164 aa19.75■□□□□ 0.75
SMC4-211ENST00000469858 A0A0U1RQJ8 604 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 DYNC1LI2O43237 492 aaPredicted RBP19.74■□□□□ 0.75
SMC4-211ENST00000469858 TOMM70O94826 608 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 C22orf31O95567 290 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 GJB1P08034 283 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 ZNF865P0CJ78 1059 aaPredicted RBP19.74■□□□□ 0.75
SMC4-211ENST00000469858 CYLC1P35663 651 aaPredicted RBP19.74■□□□□ 0.75
SMC4-211ENST00000469858 PPP3CAQ08209 521 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 RAPGEF1Q13905 1077 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 SFMBT2Q5VUG0 894 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 OLFML2BQ68BL8 750 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 ATRIPQ8WXE1 791 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 LENG1Q96BZ8 264 aaPredicted RBP19.74■□□□□ 0.75
SMC4-211ENST00000469858 TARS2Q9BW92 718 aaKnown RBP19.74■□□□□ 0.75
SMC4-211ENST00000469858 ARHGAP20Q9P2F6 1191 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 PIGRP01833 764 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 EDN1P05305 212 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 HOXD8P13378 290 aaPredicted RBP19.74■□□□□ 0.75
SMC4-211ENST00000469858 GCLMP48507 274 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 C1orf220Q5T0J3 134 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 CCDC170Q8IYT3 715 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 CCDC127Q96BQ5 260 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 ZNF668Q96K58 619 aaPredicted RBP19.74■□□□□ 0.75
SMC4-211ENST00000469858 FBXL18Q96ME1 805 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 NLRP4Q96MN2 994 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 FAM213AQ9BRX8 229 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 LZTFL1Q9NQ48 299 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 ANKFY1Q9P2R3 1169 aa19.74■□□□□ 0.75
SMC4-211ENST00000469858 KLRC1P26715 233 aa19.73■□□□□ 0.75
SMC4-211ENST00000469858 MATR3P43243 847 aaKnown RBP eCLIP19.73■□□□□ 0.757e-8■■□□□ 11.8
SMC4-211ENST00000469858 EFNA5P52803 228 aa19.73■□□□□ 0.75
SMC4-211ENST00000469858 IRF5Q13568 498 aa19.73■□□□□ 0.75
SMC4-211ENST00000469858 CDCA2Q69YH5 1023 aaPredicted RBP19.73■□□□□ 0.75
SMC4-211ENST00000469858 ZBTB8OSQ8IWT0 167 aa19.73■□□□□ 0.75
SMC4-211ENST00000469858 CCDC42Q96M95 316 aa19.73■□□□□ 0.75
SMC4-211ENST00000469858 SPAG5Q96R06 1193 aa19.73■□□□□ 0.75
SMC4-211ENST00000469858 GNEQ9Y223 722 aaKnown RBP19.73■□□□□ 0.75
SMC4-211ENST00000469858 N4BP1O75113 896 aaKnown RBP19.72■□□□□ 0.75
SMC4-211ENST00000469858 TDRD12Q587J7 1177 aaKnown RBP19.72■□□□□ 0.75
SMC4-211ENST00000469858 GJB7Q6PEY0 223 aa19.72■□□□□ 0.75
SMC4-211ENST00000469858 SYT10Q6XYQ8 523 aa19.72■□□□□ 0.75
SMC4-211ENST00000469858 TLK2Q86UE8 772 aa19.72■□□□□ 0.75
SMC4-211ENST00000469858 SYN2Q92777 582 aaPredicted RBP19.72■□□□□ 0.75
SMC4-211ENST00000469858 ZBTB45Q96K62 511 aaPredicted RBP19.72■□□□□ 0.75
SMC4-211ENST00000469858 ARHGAP39Q9C0H5 1083 aa19.72■□□□□ 0.75
SMC4-211ENST00000469858 INTS2Q9H0H0 1204 aaKnown RBP19.72■□□□□ 0.75
SMC4-211ENST00000469858 AJAP1Q9UKB5 411 aaPredicted RBP19.72■□□□□ 0.75
SMC4-211ENST00000469858 REXO2Q9Y3B8 237 aaKnown RBP19.72■□□□□ 0.75
SMC4-211ENST00000469858 COL1A2P08123 1366 aa19.72■□□□□ 0.75
SMC4-211ENST00000469858 AOC2O75106 756 aa19.72■□□□□ 0.75
SMC4-211ENST00000469858 EIF4A3P38919 411 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms