RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 YY1AP1Q9H869 796 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 CTNNAL1Q9UBT7 734 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 GOLGA6L10A0A0M3HER8 536 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 C5orf60A6NFR6 353 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 CHUKO15111 745 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 ACSL3O95573 720 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 RDXP35241 583 aaKnown RBP13.04□□□□□ -0.32
VARS2-205ENST00000469358 CCDC137Q6PK04 289 aaKnown RBP13.04□□□□□ -0.32
VARS2-205ENST00000469358 HS2ST1Q7LGA3 356 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 TCP11Q8WWU5 503 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 FAM20AQ96MK3 541 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 COA1Q9GZY4 146 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 CARD9Q9H257 536 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 OLFML3Q9NRN5 406 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 ABCF3Q9NUQ8 709 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 RGL2O15211 777 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
VARS2-205ENST00000469358 CLSTN1O94985 981 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 PAEPP09466 180 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 NPEPPSP55786 919 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 GSCP56915 257 aaPredicted RBP13.03□□□□□ -0.32
VARS2-205ENST00000469358 EPC2Q52LR7 807 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 C1orf54Q8WWF1 131 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 GEMIN8Q9NWZ8 242 aaKnown RBP13.03□□□□□ -0.32
VARS2-205ENST00000469358 INTUQ9ULD6 942 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 TRIM37O94972 964 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 RPSAP08865 295 aaKnown RBP13.03□□□□□ -0.32
VARS2-205ENST00000469358 HOXA7P31268 230 aaPredicted RBP13.03□□□□□ -0.32
VARS2-205ENST00000469358 VPS41P49754 854 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 TNIP1Q15025 636 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 SNCBQ16143 134 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 LLGL2Q6P1M3 1020 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 TBC1D1Q86TI0 1168 aaPredicted RBP13.03□□□□□ -0.32
VARS2-205ENST00000469358 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
VARS2-205ENST00000469358 CCDC105Q8IYK2 499 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 PLEKHO2Q8TD55 490 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 INTS9Q9NV88 658 aaKnown RBP13.03□□□□□ -0.32
VARS2-205ENST00000469358 BAIAP2L1Q9UHR4 511 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 PRR12Q9ULL5 1215 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 FRMPD4Q14CM0 1322 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 HIP1RO75146 1068 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 BFSP1Q12934 665 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 ABCB5Q2M3G0 1257 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 DAW1Q8N136 415 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 ACER1Q8TDN7 264 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 ATG4AQ8WYN0 398 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 AGAP1Q9UPQ3 857 aa13.03□□□□□ -0.32
VARS2-205ENST00000469358 BTAF1O14981 1849 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 GTPBP10A4D1E9 387 aaKnown RBP13.02□□□□□ -0.32
VARS2-205ENST00000469358 CYP26A1O43174 497 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 GAS7O60861 476 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 CLTAP09496 248 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 DLATP10515 647 aaKnown RBP13.02□□□□□ -0.32
VARS2-205ENST00000469358 BMP3P12645 472 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 ACCSLQ4AC99 568 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 SLC47A2Q86VL8 602 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 CCDC197Q8NCU1 140 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 SGSM3Q96HU1 749 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 POLR3CQ9BUI4 534 aaPredicted RBP13.02□□□□□ -0.32
VARS2-205ENST00000469358 TRIM7Q9C029 511 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 UNC45AQ9H3U1 944 aa13.02□□□□□ -0.32
VARS2-205ENST00000469358 TDRD3Q9H7E2 651 aaKnown RBP13.02□□□□□ -0.32
VARS2-205ENST00000469358 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.02□□□□□ -0.32
VARS2-205ENST00000469358 CCT8L1PA6NM43 557 aa13.02□□□□□ -0.33
VARS2-205ENST00000469358 TBX3O15119 743 aa13.02□□□□□ -0.33
VARS2-205ENST00000469358 CYP3A4P08684 503 aa13.02□□□□□ -0.33
VARS2-205ENST00000469358 RARAP10276 462 aa13.02□□□□□ -0.33
VARS2-205ENST00000469358 NOP9Q86U38 636 aaKnown RBP13.02□□□□□ -0.33
VARS2-205ENST00000469358 ANKRD42Q8N9B4 389 aa13.02□□□□□ -0.33
VARS2-205ENST00000469358 NYAP2Q9P242 653 aa13.02□□□□□ -0.33
VARS2-205ENST00000469358 TTC7AQ9ULT0 858 aaPredicted RBP13.02□□□□□ -0.33
VARS2-205ENST00000469358 K7ENM7 598 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 PSMD10O75832 226 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 MMP13P45452 471 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 MOXD1Q6UVY6 613 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 PRUNE1Q86TP1 453 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 HOOK3Q86VS8 718 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 ZSWIM1Q9BR11 485 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 ATAD5Q96QE3 1844 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 CLDN3O15551 220 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 PHF2O75151 1096 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 ZKSCAN8Q15776 578 aaPredicted RBP13.01□□□□□ -0.33
VARS2-205ENST00000469358 GDAP1Q8TB36 358 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 DHX38Q92620 1227 aaKnown RBP13.01□□□□□ -0.33
VARS2-205ENST00000469358 MKL1Q969V6 931 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 CCDC127Q96BQ5 260 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 LXNQ9BS40 222 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 ACTR5Q9H9F9 607 aaPredicted RBP13.01□□□□□ -0.33
VARS2-205ENST00000469358 GPRC5CQ9NQ84 441 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 PI4KBQ9UBF8 816 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 GGA2Q9UJY4 613 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 L3MBTL1Q9Y468 752 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 SPOPO43791 374 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 GH1P01241 217 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 GAP43P17677 238 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 CHRNB2P17787 502 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms