RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 TSHZ1Q6ZSZ6 1077 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 C1orf186Q6ZWK4 172 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 SRGAP1Q7Z6B7 1085 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 SH3RF1Q7Z6J0 888 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 NLRC5Q86WI3 1866 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 SYT2Q8N9I0 419 aaPredicted RBP3.91□□□□□ -1.78
TRIM59-202ENST00000468542 IQUBQ8NA54 791 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 TMEM87AQ8NBN3 555 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 SLC17A8Q8NDX2 589 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 PHOSPHO2Q8TCD6 241 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 PSPC1Q8WXF1 523 aaKnown RBP3.91□□□□□ -1.78
TRIM59-202ENST00000468542 HERVK_113Q902F9 699 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 CCDC34Q96HJ3 373 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 DYDC2Q96IM9 177 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 CDK5RAP3Q96JB5 506 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 SPATA32Q96LK8 384 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 PRIMPOLQ96LW4 560 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 DRC1Q96MC2 740 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 CCDC43Q96MW1 224 aaKnown RBP3.91□□□□□ -1.78
TRIM59-202ENST00000468542 NTPCRQ9BSD7 190 aaKnown RBP3.91□□□□□ -1.78
TRIM59-202ENST00000468542 FTHL17Q9BXU8 183 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 CELF4Q9BZC1 486 aaKnown RBP3.91□□□□□ -1.78
TRIM59-202ENST00000468542 FTOQ9C0B1 505 aaKnown RBP eCLIP3.91□□□□□ -1.78
TRIM59-202ENST00000468542 LRRC27Q9C0I9 530 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 CSRNP2Q9H175 543 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 WNT8AQ9H1J5 351 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 BHMT2Q9H2M3 363 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 IL23AQ9NPF7 189 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 XPNPEP1Q9NQW7 623 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 CHST12Q9NRB3 414 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 DDX19AQ9NUU7 478 aaKnown RBP3.91□□□□□ -1.78
TRIM59-202ENST00000468542 SEL1LQ9UBV2 794 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 CCDC39Q9UFE4 941 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 USP25Q9UHP3 1055 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 ODF2LQ9ULJ1 636 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 KIAA1024Q9UPX6 916 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 RBM19Q9Y4C8 960 aaKnown RBP3.91□□□□□ -1.78
TRIM59-202ENST00000468542 KIAA1671Q9BY89 1806 aa3.91□□□□□ -1.78
TRIM59-202ENST00000468542 MUC3AQ02505 3323 aa3.9□□□□□ -1.78
TRIM59-202ENST00000468542 UNC80Q8N2C7 3258 aa3.9□□□□□ -1.78
TRIM59-202ENST00000468542 TMEM265A0A087WTH1 108 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 ARHGEF35A5YM69 484 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 CARNS1A5YM72 827 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 GPR182O15218 404 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 NBNO60934 754 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 GPR32O75388 356 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 CHRNA1P02708 482 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 MAPTP10636 758 aaKnown RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 DARSP14868 501 aaKnown RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 CSF2RAP15509 400 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 PLCG1P19174 1290 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 SFPQP23246 707 aaKnown RBP eCLIP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 ITGB8P26012 769 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 MARCKSP29966 332 aaPredicted RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 AXLP30530 894 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 CYP2C18P33260 490 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 ARL2P36404 184 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 GRM5P41594 1212 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 MAGEA10P43363 369 aaPredicted RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 NAMPTP43490 491 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 PHKA2P46019 1235 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 ME1P48163 572 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 GPC3P51654 580 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 CLCN3P51790 818 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 SLC12A3P55017 1021 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 NPEPPSP55786 919 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 PTENP60484 403 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 ZNF200P98182 395 aaPredicted RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 AMPD3Q01432 767 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 GRIN1Q05586 938 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 DMP1Q13316 513 aaPredicted RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 NNTQ13423 1086 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 MBTPS1Q14703 1052 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 GPNMBQ14956 572 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 ECM1Q16610 540 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 FAM187BQ17R55 369 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 LRIT3Q3SXY7 679 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 MTERF2Q49AM1 385 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 NAALADL2Q58DX5 795 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 FBXO47Q5MNV8 452 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 RESP18Q5W5W9 173 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 PLA2G4FQ68DD2 849 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 CDCA2Q69YH5 1023 aaPredicted RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 MRPL14Q6P1L8 145 aaKnown RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 CNKSR3Q6P9H4 555 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 SHC4Q6S5L8 630 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 RUFY4Q6ZNE9 571 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 CABP7Q86V35 215 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 ELOA2Q8IYF1 753 aaPredicted RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 TDHQ8IZJ6 230 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 METTL13Q8N6R0 699 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 PRR7Q8TB68 274 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 FAM174AQ8TBP5 190 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 LEO1Q8WVC0 666 aaPredicted RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 DNAJB3Q8WWF6 145 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 SEPT8Q92599 483 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 LARP4BQ92615 738 aaKnown RBP3.9□□□□□ -1.79
TRIM59-202ENST00000468542 RAD54LQ92698 747 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 BADQ92934 168 aa3.9□□□□□ -1.79
TRIM59-202ENST00000468542 WNT8BQ93098 351 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms