RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 MAP2K6P52564 334 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 AGFG1P52594 562 aaKnown RBP4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 NRG3P56975 720 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 GPSM2P81274 684 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 TNFAIP2Q03169 654 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 KRT72Q14CN4 511 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 POLD3Q15054 466 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 NR0B2Q15466 257 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 FAM209BQ5JX69 171 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 OGFOD2Q6N063 350 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 BTNL9Q6UXG8 535 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 TTC7BQ86TV6 843 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 RSPH3Q86UC2 560 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 LIX1LQ8IVB5 337 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 KRT78Q8N1N4 520 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 OR2C3Q8N628 320 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 CDYL2Q8N8U2 506 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 TEX19Q8NA77 164 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 TOE1Q96GM8 510 aaKnown RBP4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 HIST1H2AHQ96KK5 128 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 NT5C1BQ96P26 610 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 HIST1H2AJQ99878 128 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 C19orf44Q9H6X5 657 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 GREM2Q9H772 168 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 ZNF287Q9HBT7 754 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 INCENPQ9NQS7 918 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 FTSJ1Q9UET6 329 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 EVLQ9UI08 416 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 CPA4Q9UI42 421 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 OGDHLQ9ULD0 1010 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 CFAP20Q9Y6A4 193 aaKnown RBP4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 A0A1W2PPL8 197 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 POM121BA6NF01 834 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 PSPNO60542 156 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 MED26O95402 600 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 ENO2P09104 434 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 MYF5P13349 255 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 TYRP1P17643 537 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 PTMSP20962 102 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 PPM1AP35813 382 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 TECP42680 631 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 MCAMP43121 646 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 MAPK9P45984 424 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 STT3AP46977 705 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 GALK1P51570 392 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 MGAT5Q09328 741 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 FGL2Q14314 439 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 CCDC38Q502W7 563 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 IZUMO3Q5VZ72 239 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 CIAPIN1Q6FI81 312 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 KANSL1Q7Z3B3 1105 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 COL23A1Q86Y22 540 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 LYSMD2Q8IV50 215 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 SLC41A1Q8IVJ1 513 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 MYCT1Q8N699 235 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 GLB1L3Q8NCI6 653 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 PDZD8Q8NEN9 1154 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 PHKBQ93100 1093 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 KIAA1191Q96A73 305 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 MISP3Q96FF7 219 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 LTV1Q96GA3 475 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 CCDC120Q96HB5 630 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 CLPTM1LQ96KA5 538 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 WDR12Q9GZL7 423 aaKnown RBP4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 C14orf93Q9H972 538 aaKnown RBP4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 PRDM7Q9NQW5 492 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 CNNM1Q9NRU3 951 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 LMBRD1Q9NUN5 540 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 TDP1Q9NUW8 608 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 C9orf78Q9NZ63 289 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 GPRC5BQ9NZH0 403 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 BTBD7Q9P203 1132 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 SLC5A6Q9Y289 635 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 PCDHA3Q9Y5H8 950 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 SLC4A7Q9Y6M7 1214 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 DGKBQ9Y6T7 804 aa4.49□□□□□ -1.69
HMGB1P25-201ENST00000468402 LRRC14BA6NHZ5 514 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 KIAA1324LA8MWY0 1029 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 NUDT19A8MXV4 375 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 NCK2O43639 380 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 AKR1B10O60218 316 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 OPHN1O60890 802 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 ZBTB7AO95365 584 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 CELA3BP08861 270 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 KITP10721 976 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 BRAFP15056 766 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 RAC2P15153 192 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 SDHBP21912 280 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 APEX1P27695 318 aaKnown RBP4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 SMARCA1P28370 1054 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 ADSLP30566 484 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 SLC7A1P30825 629 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 TRHRP34981 398 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 STAT5AP42229 794 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 PER3P56645 1201 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 RAB1AP62820 205 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 JAG1P78504 1218 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 PFKPQ01813 784 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 FOXD4Q12950 439 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 STARD3Q14849 445 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms