RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 BRAPQ7Z569 592 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 ZNF280BQ86YH2 543 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.78□□□□□ -0.36
CDHR3-205ENST00000468143 DEPTORQ8TB45 409 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 MRPS27Q92552 414 aaKnown RBP12.78□□□□□ -0.36
CDHR3-205ENST00000468143 PABPC5Q96DU9 382 aaKnown RBP12.78□□□□□ -0.36
CDHR3-205ENST00000468143 KIFC3Q9BVG8 833 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 NFKBIZQ9BYH8 718 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 CSRNP2Q9H175 543 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 NRDE2Q9H7Z3 1164 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 RSAD1Q9HA92 442 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 TBC1D13Q9NVG8 400 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 DNAJB4Q9UDY4 337 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 IPPQ9Y573 584 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 EYSQ5T1H1 3165 aa12.78□□□□□ -0.36
CDHR3-205ENST00000468143 NLRC5Q86WI3 1866 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 SFI1A8K8P3 1242 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 ZC3H11AO75152 810 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 DDHD2O94830 711 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 NPTXRO95502 500 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 POMCP01189 267 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 SSBP05455 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 NCLP19338 710 aaKnown RBP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 PDCP20941 246 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 NRIP1P48552 1158 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 PLCB3Q01970 1234 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 KRT17Q04695 432 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 GRIN1Q05586 938 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 DLX2Q07687 328 aaPredicted RBP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 CLUL1Q15846 466 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 CSPP1Q1MSJ5 1256 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 PLPP4Q5VZY2 271 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 ARL6IP4Q66PJ3 421 aaKnown RBP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 NOTUMQ6P988 496 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 ZBTB8OSQ8IWT0 167 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 SLC39A11Q8N1S5 342 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 INTS4Q96HW7 963 aaKnown RBP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 UHRF1Q96T88 793 aaPredicted RBP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 RUSC1Q9BVN2 902 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 MRPL9Q9BYD2 267 aaKnown RBP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 TRIM6Q9C030 488 aaPredicted RBP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 FZD8Q9H461 694 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 TLR9Q9NR96 1032 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 PUF60Q9UHX1 559 aaKnown RBP12.77□□□□□ -0.37
CDHR3-205ENST00000468143 CLIC4Q9Y696 253 aa12.77□□□□□ -0.37
CDHR3-205ENST00000468143 ARID2Q68CP9 1835 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 RALGAPA2Q2PPJ7 1873 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 A0A1B0GUA9 196 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 B4GALT3O60512 393 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 HIP1RO75146 1068 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 AKAP5P24588 427 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 CA8P35219 290 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 LTBRP36941 435 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 NAMPTP43490 491 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 RBM10P98175 930 aaKnown RBP12.76□□□□□ -0.37
CDHR3-205ENST00000468143 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
CDHR3-205ENST00000468143 UBE3AQ05086 875 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 RAD51AP2Q09MP3 1159 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 RESTQ13127 1097 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 PCBP1Q15365 356 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDHR3-205ENST00000468143 LEXMQ3ZCV2 418 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 CDCA2Q69YH5 1023 aaPredicted RBP12.76□□□□□ -0.37
CDHR3-205ENST00000468143 RINT1Q6NUQ1 792 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 CABP7Q86V35 215 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 TMEM173Q86WV6 379 aaPredicted RBP12.76□□□□□ -0.37
CDHR3-205ENST00000468143 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 URGCPQ8TCY9 931 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 KIFAP3Q92845 792 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 CDK5RAP3Q96JB5 506 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 IFT74Q96LB3 600 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 GAD1Q99259 594 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 TCF25Q9BQ70 676 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 NXF3Q9H4D5 531 aaKnown RBP12.76□□□□□ -0.37
CDHR3-205ENST00000468143 TLE6Q9H808 572 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
CDHR3-205ENST00000468143 MIOSQ9NXC5 875 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 KLK14Q9P0G3 267 aa12.76□□□□□ -0.37
CDHR3-205ENST00000468143 NPHP3-ACAD11A0A0J9YXS1 232 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 HIDE1A8MVS5 230 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 FSCN2O14926 492 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 NCK2O43639 380 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 EDN1P05305 212 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 PRKCBP05771 671 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 GALTP07902 379 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 IL9P15248 144 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 PPM1AP35813 382 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 MLH1P40692 756 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 SLC11A1P49279 550 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 PEX3P56589 373 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 ADAM15Q13444 863 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 PRPF4BQ13523 1007 aaKnown RBP12.75□□□□□ -0.37
CDHR3-205ENST00000468143 DHX8Q14562 1220 aaKnown RBP12.75□□□□□ -0.37
CDHR3-205ENST00000468143 PPP2R5AQ15172 486 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 MAPK6Q16659 721 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 CTC1Q2NKJ3 1217 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 FNDC1Q4ZHG4 1894 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms