RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CLUL1Q15846 466 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 DUSP6Q16828 381 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 PLPP4Q5VZY2 271 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 NOTUMQ6P988 496 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 TMEM169Q96HH4 297 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 MSLNLQ96KJ4 702 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 POP1Q99575 1024 aaKnown RBP21.19■□□□□ 0.98
COL7A1-207ENST00000467985 RAB34Q9BZG1 259 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 POLR3FQ9H1D9 316 aaPredicted RBP21.19■□□□□ 0.98
COL7A1-207ENST00000467985 TBC1D13Q9NVG8 400 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 KANSL3Q9P2N6 904 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 INPP5FQ9Y2H2 1132 aa21.19■□□□□ 0.98
COL7A1-207ENST00000467985 TRIOO75962 3097 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 TSPAN1O60635 241 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 ZC3H11AO75152 810 aaKnown RBP eCLIP21.18■□□□□ 0.98
COL7A1-207ENST00000467985 GLRA2P23416 452 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 PDIA5Q14554 519 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 LONRF3Q496Y0 759 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 UBXN11Q5T124 520 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 TMC7Q7Z402 723 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 ADHFE1Q8IWW8 467 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 C4orf32Q8N8J7 132 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 ASAP3Q8TDY4 903 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 BACH2Q9BYV9 841 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 RSAD1Q9HA92 442 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 CD320Q9NPF0 282 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 CLEC1BQ9P126 229 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 STK39Q9UEW8 545 aa21.18■□□□□ 0.98
COL7A1-207ENST00000467985 MEIS3P2A8K0S8 358 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 LAD1O00515 517 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 PER2O15055 1255 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 NCLP19338 710 aaKnown RBP21.17■□□□□ 0.98
COL7A1-207ENST00000467985 ZP2Q05996 745 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 MBTD1Q05BQ5 628 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 SMC1AQ14683 1233 aaKnown RBP21.17■□□□□ 0.98
COL7A1-207ENST00000467985 POTEGQ6S5H5 508 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 AGMOQ6ZNB7 445 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 SMRP1Q8NCR6 262 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 TMX3Q96JJ7 454 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 LRWD1Q9UFC0 647 aa21.17■□□□□ 0.98
COL7A1-207ENST00000467985 A0A087WWV3 80 aa21.16■□□□□ 0.98
COL7A1-207ENST00000467985 ARHGEF35A5YM69 484 aa21.16■□□□□ 0.98
COL7A1-207ENST00000467985 GLP2RO95838 553 aa21.16■□□□□ 0.98
COL7A1-207ENST00000467985 ITGA4P13612 1032 aa21.16■□□□□ 0.98
COL7A1-207ENST00000467985 PTGDRQ13258 359 aa21.16■□□□□ 0.98
COL7A1-207ENST00000467985 HACE1Q8IYU2 909 aa21.16■□□□□ 0.98
COL7A1-207ENST00000467985 CSRNP2Q9H175 543 aa21.16■□□□□ 0.98
COL7A1-207ENST00000467985 NRDE2Q9H7Z3 1164 aa21.16■□□□□ 0.98
COL7A1-207ENST00000467985 C19orf67A6NJJ6 358 aa21.15■□□□□ 0.98
COL7A1-207ENST00000467985 CCT6AP40227 531 aaKnown RBP21.15■□□□□ 0.98
COL7A1-207ENST00000467985 TOB1P50616 345 aaPredicted RBP21.15■□□□□ 0.98
COL7A1-207ENST00000467985 AMHR2Q16671 573 aa21.15■□□□□ 0.98
COL7A1-207ENST00000467985 PADI6Q6TGC4 694 aa21.15■□□□□ 0.98
COL7A1-207ENST00000467985 TMEM184AQ6ZMB5 413 aa21.15■□□□□ 0.98
COL7A1-207ENST00000467985 DDX53Q86TM3 631 aaKnown RBP21.15■□□□□ 0.98
COL7A1-207ENST00000467985 MRPL43Q8N983 215 aaKnown RBP21.15■□□□□ 0.98
COL7A1-207ENST00000467985 IGSF21Q96ID5 467 aa21.15■□□□□ 0.98
COL7A1-207ENST00000467985 PRIMPOLQ96LW4 560 aa21.15■□□□□ 0.98
COL7A1-207ENST00000467985 TBC1D32Q96NH3 1257 aa21.15■□□□□ 0.98
COL7A1-207ENST00000467985 FAM193BQ96PV7 902 aaPredicted RBP21.15■□□□□ 0.98
COL7A1-207ENST00000467985 TRIM6Q9C030 488 aaPredicted RBP21.15■□□□□ 0.98
COL7A1-207ENST00000467985 C2orf40Q9H1Z8 148 aa21.15■□□□□ 0.98
COL7A1-207ENST00000467985 BARX2Q9UMQ3 279 aaPredicted RBP21.15■□□□□ 0.98
COL7A1-207ENST00000467985 IPPQ9Y573 584 aa21.15■□□□□ 0.98
COL7A1-207ENST00000467985 LRRIQ4A6NIV6 560 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 HIDE1A8MVS5 230 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 NT5C1B-RDH14C9J2C7 533 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 PI4K2BG5E9Z4 385 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 GALTP07902 379 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 ARF4P18085 180 aaPredicted RBP21.14■□□□□ 0.97
COL7A1-207ENST00000467985 CYP11B2P19099 503 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 PRPHP41219 470 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 GIT2Q14161 759 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 NBR1Q14596 966 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 RILPL1Q5EBL4 403 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 MCTP1Q6DN14 999 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 ZBTB8OSQ8IWT0 167 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 IGSF22Q8N9C0 903 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 SMG8Q8ND04 991 aaKnown RBP21.14■□□□□ 0.97
COL7A1-207ENST00000467985 CPB2Q96IY4 423 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 TMEM175Q9BSA9 504 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 GBP3Q9H0R5 595 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 EPHX3Q9H6B9 360 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 GPRC5CQ9NQ84 441 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 PRMT7Q9NVM4 692 aaPredicted RBP21.14■□□□□ 0.97
COL7A1-207ENST00000467985 DAXXQ9UER7 740 aaPredicted RBP21.14■□□□□ 0.97
COL7A1-207ENST00000467985 PCDHB6Q9Y5E3 794 aa21.14■□□□□ 0.97
COL7A1-207ENST00000467985 C2orf71A6NGG8 1288 aa21.13■□□□□ 0.97
COL7A1-207ENST00000467985 INPPL1O15357 1258 aa21.13■□□□□ 0.97
COL7A1-207ENST00000467985 ALADP13716 330 aa21.13■□□□□ 0.97
COL7A1-207ENST00000467985 KCNC3Q14003 757 aa21.13■□□□□ 0.97
COL7A1-207ENST00000467985 CDCA2Q69YH5 1023 aaPredicted RBP21.13■□□□□ 0.97
COL7A1-207ENST00000467985 SLC27A1Q6PCB7 646 aa21.13■□□□□ 0.97
COL7A1-207ENST00000467985 PPP4R3CPQ6ZMV5 832 aa21.13■□□□□ 0.97
COL7A1-207ENST00000467985 MAEAQ7L5Y9 396 aa21.13■□□□□ 0.97
COL7A1-207ENST00000467985 VPS52Q8N1B4 723 aa21.13■□□□□ 0.97
COL7A1-207ENST00000467985 EIF2AQ9BY44 585 aaKnown RBP21.13■□□□□ 0.97
COL7A1-207ENST00000467985 DNAJB4Q9UDY4 337 aa21.13■□□□□ 0.97
COL7A1-207ENST00000467985 A0A1B0GUA9 196 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 H3BQV1 296 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms