RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 PCDHGA5Q9Y5G8 931 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 ACACAQ13085 2346 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 PCNX2A6NKB5 2137 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 HECTD1Q9ULT8 2610 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 A0A0U1RQF3 1178 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 TEX28O15482 410 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 GAS2O43903 313 aaKnown RBP13.36□□□□□ -0.27
VPS26A-204ENST00000467852 URODP06132 367 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 PLA2G2AP14555 144 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 TRAF1Q13077 416 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 CACNA2D4Q7Z3S7 1137 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 FTSJ3Q8IY81 847 aaKnown RBP13.36□□□□□ -0.27
VPS26A-204ENST00000467852 HNRNPLLQ8WVV9 542 aaKnown RBP13.36□□□□□ -0.27
VPS26A-204ENST00000467852 LRIG1Q96JA1 1093 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 CDHR1Q96JP9 859 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 PPP1R16BQ96T49 567 aa13.36□□□□□ -0.27
VPS26A-204ENST00000467852 RYDENQ9NUL5 291 aaKnown RBP13.36□□□□□ -0.27
VPS26A-204ENST00000467852 ATP9AO75110 1047 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 PARP1P09874 1014 aaKnown RBP13.35□□□□□ -0.27
VPS26A-204ENST00000467852 RDXP35241 583 aaKnown RBP13.35□□□□□ -0.27
VPS26A-204ENST00000467852 MPLP40238 635 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 RAP1GAPP47736 663 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 ZNF598Q86UK7 904 aaKnown RBP13.35□□□□□ -0.27
VPS26A-204ENST00000467852 ZNF687Q8N1G0 1237 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 SPEM1Q8N4L4 309 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 FGF13Q92913 245 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 RPS6KC1Q96S38 1066 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 RAI2Q9Y5P3 530 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 FRMPD4Q14CM0 1322 aa13.35□□□□□ -0.27
VPS26A-204ENST00000467852 SPTA1P02549 2419 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 ZBTB5O15062 677 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 C1RP00736 705 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 PRB1P04280 392 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 CAPNS1P04632 268 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 KCNA2P16389 499 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 SLC11A1P49279 550 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 PCNX4Q63HM2 1172 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 PLPPR4Q7Z2D5 763 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 GRASPQ7Z6J2 395 aaPredicted RBP13.34□□□□□ -0.27
VPS26A-204ENST00000467852 WDR5BQ86VZ2 330 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 PIK3R5Q8WYR1 880 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 FAM3CQ92520 227 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 DNASE1L2Q92874 299 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 PCYT2Q99447 389 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 ECHDC1Q9NTX5 307 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 TBC1D13Q9NVG8 400 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
VPS26A-204ENST00000467852 SHISA7A6NL88 538 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 K7ESF4 209 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 TK2O00142 265 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 HMMRO75330 724 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 PAPSS2O95340 614 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-204ENST00000467852 SOD2P04179 222 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 STAT5BP51692 787 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 FGD1P98174 961 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 DGKHQ86XP1 1220 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 PALB2Q86YC2 1186 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 GPRASP2Q96D09 838 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 KAT14Q9H8E8 782 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 DNAJB4Q9UDY4 337 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 KALRNO60229 2985 aa13.33□□□□□ -0.28
VPS26A-204ENST00000467852 ZNF462Q96JM2 2506 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 PPP1R11O60927 126 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-204ENST00000467852 GPR32O75388 356 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 ALDH2P05091 517 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 NOMO2Q5JPE7 1267 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 TCEAL6Q6IPX3 200 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 GLB1LQ6UWU2 654 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 KBTBD6Q86V97 674 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 GAB3Q8WWW8 586 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 TCEAL3Q969E4 200 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 UBL7Q96S82 380 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-204ENST00000467852 INPP5FQ9Y2H2 1132 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 FAN1Q9Y2M0 1017 aa13.32□□□□□ -0.28
VPS26A-204ENST00000467852 ASCC3Q8N3C0 2202 aaKnown RBP13.31□□□□□ -0.28
VPS26A-204ENST00000467852 URB1O60287 2271 aaKnown RBP13.31□□□□□ -0.28
VPS26A-204ENST00000467852 FAM221BA6H8Z2 402 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 TGM5O43548 720 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 HBP1O60381 514 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 ECI2O75521 394 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 RPP40O75818 363 aaKnown RBP13.31□□□□□ -0.28
VPS26A-204ENST00000467852 VTNP04004 478 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 CCDC192P0DO97 292 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 SCAPQ12770 1279 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 DEFB124Q8NES8 71 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 FAM193BQ96PV7 902 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-204ENST00000467852 ZKSCAN3Q9BRR0 538 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 HERC2P3Q9BVR0 1158 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 SLC32A1Q9H598 525 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 RXFP1Q9HBX9 757 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 TMEM9BQ9NQ34 198 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
VPS26A-204ENST00000467852 BAZ2BQ9UIF8 2168 aaKnown RBP13.3□□□□□ -0.28
VPS26A-204ENST00000467852 H0Y626 953 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms