RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PI4K2BG5E9Z4 385 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 ARL4CP56559 192 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 LRRC63Q05C16 580 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 ANGEL2Q5VTE6 544 aaKnown RBP9.28□□□□□ -0.92
HPS4-209ENST00000466781 PATL1Q86TB9 770 aaKnown RBP9.28□□□□□ -0.92
HPS4-209ENST00000466781 RHOT2Q8IXI1 618 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 SIRT2Q8IXJ6 389 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 PARK7Q99497 189 aaKnown RBP9.28□□□□□ -0.92
HPS4-209ENST00000466781 ZMYND12Q9H0C1 365 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 PDE11AQ9HCR9 933 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 TRPC7Q9HCX4 862 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 CYP26B1Q9NR63 512 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 POLR3EQ9NVU0 708 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 SELENONQ9NZV5 590 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 TMEM63CQ9P1W3 806 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 ZSWIM5Q9P217 1185 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 RNF14Q9UBS8 474 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 PLEKHA8P1O95397 391 aa9.27□□□□□ -0.92
HPS4-209ENST00000466781 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.92
HPS4-209ENST00000466781 COPS2P61201 443 aa9.27□□□□□ -0.92
HPS4-209ENST00000466781 ZNF394Q53GI3 561 aa9.27□□□□□ -0.92
HPS4-209ENST00000466781 FAM133BQ5BKY9 247 aaKnown RBP9.27□□□□□ -0.92
HPS4-209ENST00000466781 GRAMD1CQ8IYS0 662 aa9.27□□□□□ -0.92
HPS4-209ENST00000466781 SCAF8Q9UPN6 1271 aaKnown RBP9.27□□□□□ -0.92
HPS4-209ENST00000466781 COPEO14579 308 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 ESRRAP11474 423 aaPredicted RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 SMARCA1P28370 1054 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 NME3Q13232 169 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 TAF1CQ15572 869 aaPredicted RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 FSCBQ5H9T9 825 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 TTC13Q8NBP0 860 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 ABHD8Q96I13 439 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 SPATA33Q96N06 139 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 TRIM55Q9BYV6 548 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 MCF2P10911 925 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 LIG3P49916 1009 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 PGBD3Q8N328 593 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 NSUN6Q8TEA1 469 aaKnown RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 MXD3Q9BW11 206 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 ASPSCR1Q9BZE9 553 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 RPAP3Q9H6T3 665 aaPredicted RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 MYOZ2Q9NPC6 264 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 KRT37O76014 449 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 ALDH1A1P00352 501 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 CXCR5P32302 372 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 BLVRAP53004 296 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 PASD1Q8IV76 773 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 NEK9Q8TD19 979 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 DCUN1D1Q96GG9 259 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 NAF1Q96HR8 494 aaKnown RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 CALR3Q96L12 384 aaKnown RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 CPVLQ9H3G5 476 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 SAYSD1Q9NPB0 183 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 TBC1D22BQ9NU19 505 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 GGA3Q9NZ52 723 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 SENP1Q9P0U3 644 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 ZNF70Q9UC06 446 aaPredicted RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 HERC5Q9UII4 1024 aaKnown RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 PCDHB8Q9UN66 801 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 PCDHA5Q9Y5H7 936 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 SFI1A8K8P3 1242 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 SYCE1LA8MT33 242 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 TNPO2O14787 897 aaKnown RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 CYP2E1P05181 493 aaPredicted RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 CCNE1P24864 410 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 ADORA2BP29275 332 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 AP1B1Q10567 949 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 IFT88Q13099 833 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 TFDP2Q14188 446 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 SF3B3Q15393 1217 aaKnown RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 ITPRIPL1Q6GPH6 555 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 TMEM35BQ8NCS4 154 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 OTUB1Q96FW1 271 aaPredicted RBP9.27□□□□□ -0.93
HPS4-209ENST00000466781 ADAM22Q9P0K1 906 aa9.27□□□□□ -0.93
HPS4-209ENST00000466781 MOCS2O96007 188 aaPredicted RBP9.26□□□□□ -0.93
HPS4-209ENST00000466781 CCT5P48643 541 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 ST8SIA6P61647 398 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 ETF1P62495 437 aaKnown RBP9.26□□□□□ -0.93
HPS4-209ENST00000466781 SPP2Q13103 211 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 KYAT1Q16773 422 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 SYTL3Q4VX76 610 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 RCSD1Q6JBY9 416 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 MB21D1Q8N884 522 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 KDM4CQ9H3R0 1056 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 SEL1LQ9UBV2 794 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 TRIM33Q9UPN9 1127 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 ZNF263O14978 683 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 KRT76Q01546 638 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 ADCY2Q08462 1091 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 BTBD8Q5XKL5 378 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 PIGOQ8TEQ8 1089 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 KLHL29Q96CT2 875 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 FAM84BQ96KN1 310 aaPredicted RBP9.26□□□□□ -0.93
HPS4-209ENST00000466781 AP1M1Q9BXS5 423 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 MRPL4Q9BYD3 311 aaKnown RBP9.26□□□□□ -0.93
HPS4-209ENST00000466781 BHMT2Q9H2M3 363 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 MRPL40Q9NQ50 206 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms