RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 CEP170P1Q96L14 293 aa18.2■□□□□ 0.5
BRD9-201ENST00000466684 FAM20AQ96MK3 541 aa18.2■□□□□ 0.5
BRD9-201ENST00000466684 SLKQ9H2G2 1235 aaPredicted RBP18.2■□□□□ 0.5
BRD9-201ENST00000466684 SMOC2Q9H3U7 446 aa18.2■□□□□ 0.5
BRD9-201ENST00000466684 ZSWIM6Q9HCJ5 1215 aa18.2■□□□□ 0.5
BRD9-201ENST00000466684 CYP46A1Q9Y6A2 500 aa18.2■□□□□ 0.5
BRD9-201ENST00000466684 P4HBP07237 508 aaKnown RBP18.19■□□□□ 0.5
BRD9-201ENST00000466684 RFC5P40937 340 aa18.19■□□□□ 0.5
BRD9-201ENST00000466684 CLCN5P51795 746 aa18.19■□□□□ 0.5
BRD9-201ENST00000466684 NPY5RQ15761 445 aa18.19■□□□□ 0.5
BRD9-201ENST00000466684 INF2Q27J81 1249 aa18.19■□□□□ 0.5
BRD9-201ENST00000466684 LETM2Q2VYF4 491 aa18.19■□□□□ 0.5
BRD9-201ENST00000466684 KLHL5Q96PQ7 755 aa18.19■□□□□ 0.5
BRD9-201ENST00000466684 VN1R3Q9BXE9 311 aa18.19■□□□□ 0.5
BRD9-201ENST00000466684 MRPL17Q9NRX2 175 aaKnown RBP18.19■□□□□ 0.5
BRD9-201ENST00000466684 FAN1Q9Y2M0 1017 aa18.19■□□□□ 0.5
BRD9-201ENST00000466684 ZFHX2Q9C0A1 2572 aaPredicted RBP18.19■□□□□ 0.5
BRD9-201ENST00000466684 DENND4AQ7Z401 1863 aa18.19■□□□□ 0.5
BRD9-201ENST00000466684 EML1O00423 815 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 EPB41L2O43491 1005 aaKnown RBP18.18■□□□□ 0.5
BRD9-201ENST00000466684 SLC37A4O43826 429 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 DDHD2O94830 711 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 SSBP05455 408 aaKnown RBP eCLIP18.18■□□□□ 0.5
BRD9-201ENST00000466684 SRGAP2CP0DJJ0 459 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 GCFC2P16383 781 aaKnown RBP18.18■□□□□ 0.5
BRD9-201ENST00000466684 CLCN4P51793 760 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 NPEPPSP55786 919 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 PPP4R3AQ6IN85 833 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 C15orf39Q6ZRI6 1047 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 CNNM3Q8NE01 707 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 TCP11Q8WWU5 503 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 PRPF31Q8WWY3 499 aaKnown RBP18.18■□□□□ 0.5
BRD9-201ENST00000466684 DHX33Q9H6R0 707 aaKnown RBP18.18■□□□□ 0.5
BRD9-201ENST00000466684 KCNMB3Q9NPA1 279 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 UBN1Q9NPG3 1134 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 VAV3Q9UKW4 847 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 SSX2IPQ9Y2D8 614 aa18.18■□□□□ 0.5
BRD9-201ENST00000466684 CCDC194A0A1B0GVG4 234 aa18.17■□□□□ 0.5
BRD9-201ENST00000466684 ASAP2O43150 1006 aa18.17■□□□□ 0.5
BRD9-201ENST00000466684 GAS2O43903 313 aaKnown RBP18.17■□□□□ 0.5
BRD9-201ENST00000466684 B4GALT3O60512 393 aa18.17■□□□□ 0.5
BRD9-201ENST00000466684 CNPP09543 421 aaKnown RBP18.17■□□□□ 0.5
BRD9-201ENST00000466684 LAMTOR4Q0VGL1 99 aa18.17■□□□□ 0.5
BRD9-201ENST00000466684 ELMSAN1Q6PJG2 1045 aa18.17■□□□□ 0.5
BRD9-201ENST00000466684 OTUD6AQ7L8S5 288 aa18.17■□□□□ 0.5
BRD9-201ENST00000466684 TMEM143Q96AN5 459 aa18.17■□□□□ 0.5
BRD9-201ENST00000466684 SNX27Q96L92 541 aa18.17■□□□□ 0.5
BRD9-201ENST00000466684 NAP1L4Q99733 375 aaKnown RBP18.17■□□□□ 0.5
BRD9-201ENST00000466684 DPP7Q9UHL4 492 aa18.17■□□□□ 0.5
BRD9-201ENST00000466684 NRP1O14786 923 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 TBX3O15119 743 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 LILRB3O75022 631 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 URODP06132 367 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 NCLP19338 710 aaKnown RBP18.16■□□□□ 0.5
BRD9-201ENST00000466684 HOXA11P31270 313 aaPredicted RBP18.16■□□□□ 0.5
BRD9-201ENST00000466684 NBL1P41271 181 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 TDGQ13569 410 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 PCBP1Q15365 356 aaKnown RBP eCLIP18.16■□□□□ 0.5
BRD9-201ENST00000466684 UBXN11Q5T124 520 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 NEK8Q86SG6 692 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 C4orf19Q8IY42 314 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 ZNF579Q8NAF0 562 aaKnown RBP18.16■□□□□ 0.5
BRD9-201ENST00000466684 AIFM3Q96NN9 605 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 MINDY3Q9H8M7 445 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 PLXNA3P51805 1871 aa18.16■□□□□ 0.5
BRD9-201ENST00000466684 MARCH6O60337 910 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 CDKL5O76039 1030 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 ERLIN2O94905 339 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 POMCP01189 267 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 SOD2P04179 222 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 XBP1P17861 261 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 YWHABP31946 246 aaKnown RBP18.15■□□□□ 0.5
BRD9-201ENST00000466684 AFF1P51825 1210 aaKnown RBP18.15■□□□□ 0.5
BRD9-201ENST00000466684 NCBP1Q09161 790 aaKnown RBP18.15■□□□□ 0.5
BRD9-201ENST00000466684 STK3Q13188 491 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 EPHA7Q15375 998 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 RNF149Q8NC42 400 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 FLCNQ8NFG4 579 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 CMASQ8NFW8 434 aaPredicted RBP18.15■□□□□ 0.5
BRD9-201ENST00000466684 LXNQ9BS40 222 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 WRAP73Q9P2S5 460 aaPredicted RBP18.15■□□□□ 0.5
BRD9-201ENST00000466684 KCNJ14Q9UNX9 436 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 CCNT1O60563 726 aaKnown RBP18.15■□□□□ 0.5
BRD9-201ENST00000466684 ADH1AP07327 375 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 ITGA4P13612 1032 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 AXLP30530 894 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 AK2P54819 239 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 EMC2Q15006 297 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 CYP26C1Q6V0L0 522 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 RPS6KC1Q96S38 1066 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 HERC2P3Q9BVR0 1158 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 TM6SF1Q9BZW5 370 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 KCNK12Q9HB15 430 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 MAN1C1Q9NR34 630 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 IGSF9Q9P2J2 1179 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 DUSP12Q9UNI6 340 aa18.15■□□□□ 0.5
BRD9-201ENST00000466684 C2CD2LO14523 706 aa18.14■□□□□ 0.49
BRD9-201ENST00000466684 NR1I2O75469 434 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms