RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 GDAQ9Y2T3 454 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 A0A1B0GUA9 196 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 IPO5O00410 1097 aaKnown RBP16.72■□□□□ 0.27
SNED1-208ENST00000466618 ADCY3O60266 1144 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 PSMD10O75832 226 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 CLSTN1O94985 981 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 ARIH2O95376 493 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 GRIK3Q13003 919 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 PRAMEF19Q5SWL8 479 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 ZNF658Q5TYW1 1059 aaPredicted RBP16.72■□□□□ 0.27
SNED1-208ENST00000466618 PDXDC2PQ6P474 469 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 RAET1EQ8TD07 263 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 SENP7Q9BQF6 1050 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 TSGA10Q9BZW7 698 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 MLXIPQ9HAP2 919 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 RBM12Q9NTZ6 932 aaKnown RBP16.72■□□□□ 0.27
SNED1-208ENST00000466618 PTPN22Q9Y2R2 807 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 HYOU1Q9Y4L1 999 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 GLI1P08151 1106 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 ELNP15502 786 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 PRCPP42785 496 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 CCNHP51946 323 aaPredicted RBP16.72■□□□□ 0.27
SNED1-208ENST00000466618 BYSLQ13895 437 aaKnown RBP16.72■□□□□ 0.27
SNED1-208ENST00000466618 B3GNT9Q6UX72 402 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 SLFN12Q8IYM2 578 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 RIT2Q99578 217 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 NFU1Q9UMS0 254 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 MAPK8IP1Q9UQF2 711 aa16.72■□□□□ 0.27
SNED1-208ENST00000466618 ZSCAN5CA6NGD5 496 aaPredicted RBP16.71■□□□□ 0.27
SNED1-208ENST00000466618 HMGB1P1B2RPK0 211 aaPredicted RBP16.71■□□□□ 0.27
SNED1-208ENST00000466618 TACC1O75410 805 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 IPO7O95373 1038 aaKnown RBP16.71■□□□□ 0.27
SNED1-208ENST00000466618 MOCS3O95396 460 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 CYBAP13498 195 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 CXCR5P32302 372 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 KLK7P49862 253 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 SPIRE1Q08AE8 756 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 TRIM32Q13049 653 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 QPCTQ16769 361 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 GLE1Q53GS7 698 aaKnown RBP16.71■□□□□ 0.27
SNED1-208ENST00000466618 MAP3K21Q5TCX8 1036 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 MFSD14CQ5VZR4 134 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 TRPV1Q8NER1 839 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 UIMC1Q96RL1 719 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 PSMB7Q99436 277 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 PPANQ9NQ55 473 aaKnown RBP16.71■□□□□ 0.27
SNED1-208ENST00000466618 VAV3Q9UKW4 847 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 PTCH2Q9Y6C5 1203 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 CENPFP49454 3210 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 CASP8AP2Q9UKL3 1982 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 GTPBP6O43824 516 aaPredicted RBP16.71■□□□□ 0.27
SNED1-208ENST00000466618 TCP1P17987 556 aaKnown RBP16.71■□□□□ 0.27
SNED1-208ENST00000466618 TXKP42681 527 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 SCTRP47872 440 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.27
SNED1-208ENST00000466618 PMS1P54277 932 aaKnown RBP16.71■□□□□ 0.27
SNED1-208ENST00000466618 XRCC4Q13426 336 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 TMEM63BQ5T3F8 832 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 BCAS3Q9H6U6 928 aa16.71■□□□□ 0.27
SNED1-208ENST00000466618 NFASCO94856 1347 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 MGRN1O60291 552 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 HMGCRP04035 888 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 UBA1P22314 1058 aaKnown RBP16.7■□□□□ 0.26
SNED1-208ENST00000466618 SLC8A1P32418 973 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 ADCYAP1R1P41586 468 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 CACNB2Q08289 660 aaPredicted RBP16.7■□□□□ 0.26
SNED1-208ENST00000466618 LY6KQ17RY6 165 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 IQSEC1Q6DN90 963 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 DTHD1Q6ZMT9 781 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 IFT20Q8IY31 132 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 SLAIN1Q8ND83 568 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 RNF217Q8TC41 542 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 TBC1D22BQ9NU19 505 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 PCDHA12Q9UN75 941 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 ESYT3A0FGR9 886 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 PES1O00541 588 aaKnown RBP16.7■□□□□ 0.26
SNED1-208ENST00000466618 EEF1GP26641 437 aaKnown RBP16.7■□□□□ 0.26
SNED1-208ENST00000466618 ZBED6P86452 979 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 TTLL4Q14679 1199 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 LACTB2Q53H82 288 aaPredicted RBP16.7■□□□□ 0.26
SNED1-208ENST00000466618 CCDC181Q5TID7 509 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 MAB21L3Q8N8X9 362 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 C3orf20Q8ND61 904 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 RASSF8Q8NHQ8 419 aa16.7■□□□□ 0.26
SNED1-208ENST00000466618 ZNHIT6Q9NWK9 470 aaKnown RBP16.7■□□□□ 0.26
SNED1-208ENST00000466618 BCCIPQ9P287 314 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNED1-208ENST00000466618 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.69■□□□□ 0.26
SNED1-208ENST00000466618 ADCY6O43306 1168 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 NCK2O43639 380 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 PLEKP08567 350 aaPredicted RBP16.69■□□□□ 0.26
SNED1-208ENST00000466618 TXNP10599 105 aaKnown RBP16.69■□□□□ 0.26
SNED1-208ENST00000466618 CALRP27797 417 aaKnown RBP16.69■□□□□ 0.26
SNED1-208ENST00000466618 GRK4P32298 578 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 SLC8A3P57103 927 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 IFFO1Q0D2I5 559 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 PAK2Q13177 524 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 PPP2R5CQ13362 524 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 PDIA5Q14554 519 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms