RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 GCNT1Q02742 428 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 DRP2Q13474 957 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 MTMR1Q13613 665 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 PLS1Q14651 629 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 RRP1BQ14684 758 aaKnown RBP7.41□□□□□ -1.22
CDHR3-204ENST00000466351 SYDE1Q6ZW31 735 aaPredicted RBP7.41□□□□□ -1.22
CDHR3-204ENST00000466351 TAX1BP1Q86VP1 789 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 HOOK3Q86VS8 718 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 NIM1KQ8IY84 436 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 FAM71AQ8IYT1 594 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 SYCP3Q8IZU3 236 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 ANKRD13CQ8N6S4 541 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 MCPH1Q8NEM0 835 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 CYP2W1Q8TAV3 490 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 LNX1Q8TBB1 728 aaPredicted RBP7.41□□□□□ -1.22
CDHR3-204ENST00000466351 ACER1Q8TDN7 264 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 HDAC7Q8WUI4 952 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 CLEC4DQ8WXI8 215 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 PPM1EQ8WY54 764 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 SHC3Q92529 594 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 ATP6V0A1Q93050 837 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 FAM212AQ96EL1 285 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 ZIM3Q96PE6 472 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 KRT12Q99456 494 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 TMEM109Q9BVC6 243 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 PACSIN1Q9BY11 444 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 CNOT10Q9H9A5 744 aaKnown RBP7.41□□□□□ -1.22
CDHR3-204ENST00000466351 TMEM8AQ9HCN3 771 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 PPP1R9AQ9ULJ8 1098 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 RRP15Q9Y3B9 282 aaKnown RBP7.41□□□□□ -1.22
CDHR3-204ENST00000466351 ZHX2Q9Y6X8 837 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 GRIN2DO15399 1336 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 IGSF9BQ9UPX0 1349 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 ZSWIM8A7E2V4 1837 aa7.41□□□□□ -1.22
CDHR3-204ENST00000466351 PHF20L1A8MW92 1017 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 MYO1CO00159 1063 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 EBAG9O00559 213 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 NDC80O14777 642 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 DDX3YO15523 660 aaKnown RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 MAP3K13O43283 966 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CEP104O60308 925 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 BUB1BO60566 1050 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 PIGRP01833 764 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 MYZAPP0CAP1 466 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 ARP10275 920 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 NR1D1P20393 614 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 TNFAIP3P21580 790 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 ECHS1P30084 290 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 MAGEA9P43362 315 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CARSP49589 748 aaKnown RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 IRAK1P51617 712 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 BPIFB4P59827 614 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 ERVK-9P63128 1117 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 GPC5P78333 572 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CLDN10P78369 228 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 ARID5AQ03989 594 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 PTP4A2Q12974 167 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 DMP1Q13316 513 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 PLCB4Q15147 1175 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 EZH2Q15910 746 aaKnown RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 SHROOM1Q2M3G4 852 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CBWD6Q4V339 395 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 BRDTQ58F21 947 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CBWD3Q5JTY5 395 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CBWD5Q5RIA9 395 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 DCAF15Q66K64 600 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 KRT39Q6A163 491 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 TRIM72Q6ZMU5 477 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CEP128Q6ZU80 1094 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 OTUD6AQ7L8S5 288 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 HAUS6Q7Z4H7 955 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 TMC3Q7Z5M5 1100 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 GLYCTKQ8IVS8 523 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 SPICE1Q8N0Z3 855 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 LARGE2Q8N3Y3 721 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 TSEN2Q8NCE0 465 aaKnown RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 SLC35G2Q8TBE7 412 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 EPS8L1Q8TE68 723 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 PIGOQ8TEQ8 1089 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 U2AF1L4Q8WU68 220 aaKnown RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CASKIN2Q8WXE0 1202 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CENPTQ96BT3 561 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 RNPC3Q96LT9 517 aaKnown RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CCDC43Q96MW1 224 aaKnown RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 AGPAT1Q99943 283 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 TXLNGYQ9BZA5 131 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 STMN4Q9H169 189 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 TAOK3Q9H2K8 898 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 RASSF4Q9H2L5 321 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 TMBIM4Q9HC24 238 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 AVENQ9NQS1 362 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 HSPBP1Q9NZL4 362 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 CNOT7Q9UIV1 285 aaKnown RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 NFU1Q9UMS0 254 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 PPP2R3BQ9Y5P8 575 aa7.4□□□□□ -1.22
CDHR3-204ENST00000466351 ASTN2O75129 1339 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-204ENST00000466351 EMSYQ7Z589 1322 aa7.39□□□□□ -1.23
CDHR3-204ENST00000466351 ZNF233A6NK53 670 aa7.39□□□□□ -1.23
CDHR3-204ENST00000466351 TMCO5BA8MYB1 307 aa7.39□□□□□ -1.23
CDHR3-204ENST00000466351 TCP10L2B9ZVM9 353 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms