RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 USP36Q9P275 1121 aaKnown RBP5.92□□□□□ -1.46
LRCH3-211ENST00000466054 Q9UFV3 132 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 PHLDB1Q86UU1 1377 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 ID4P47928 161 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 SESN3P58005 492 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 DDB1Q16531 1140 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 LY6G5CQ5SRR4 150 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 TRIM68Q6AZZ1 485 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 MRGPREQ86SM8 312 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 PRIMA1Q86XR5 153 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 VRK3Q8IV63 474 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 ANKRD13AQ8IZ07 590 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 PRPF38AQ8NAV1 312 aaKnown RBP5.91□□□□□ -1.46
LRCH3-211ENST00000466054 HIPK4Q8NE63 616 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 SLC5A5Q92911 643 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 FOXB1Q99853 325 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 GPR87Q9BY21 358 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 ZMAT4Q9H898 229 aa5.91□□□□□ -1.46
LRCH3-211ENST00000466054 UBA6A0AVT1 1052 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-211ENST00000466054 PMS2P1A4D2B8 440 aa5.9□□□□□ -1.46
LRCH3-211ENST00000466054 ZNF37AP17032 561 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-211ENST00000466054 PTX3P26022 381 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-211ENST00000466054 CDKN1CP49918 316 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-211ENST00000466054 TMPRSS15P98073 1019 aa5.9□□□□□ -1.46
LRCH3-211ENST00000466054 HGFACQ04756 655 aa5.9□□□□□ -1.46
LRCH3-211ENST00000466054 TOB2Q14106 344 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-211ENST00000466054 TERF2Q15554 542 aa5.9□□□□□ -1.46
LRCH3-211ENST00000466054 GAREM2Q75VX8 874 aa5.9□□□□□ -1.46
LRCH3-211ENST00000466054 RTN4RL1Q86UN2 441 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-211ENST00000466054 RASSF3Q86WH2 238 aa5.9□□□□□ -1.46
LRCH3-211ENST00000466054 CALML6Q8TD86 181 aa5.9□□□□□ -1.46
LRCH3-211ENST00000466054 FOXRED1Q96CU9 486 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-211ENST00000466054 AGO3Q9H9G7 860 aaKnown RBP5.9□□□□□ -1.46
LRCH3-211ENST00000466054 TYW1Q9NV66 732 aaKnown RBP5.9□□□□□ -1.46
LRCH3-211ENST00000466054 PRAMEF22A3QJZ6 481 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 RAB11FIP3O75154 756 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 MPIG6BO95866 241 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 ITGB6P18564 788 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 CD83Q01151 205 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 ALDH6A1Q02252 535 aaKnown RBP5.89□□□□□ -1.47
LRCH3-211ENST00000466054 TTC38Q5R3I4 469 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 BROXQ5VW32 411 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 IQSEC1Q6DN90 963 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 ESRP1Q6NXG1 681 aaKnown RBP5.89□□□□□ -1.47
LRCH3-211ENST00000466054 PHYKPLQ8IUZ5 450 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 ZNF276Q8N554 614 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 PROKR1Q8TCW9 393 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 BTBD2Q9BX70 525 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 PUS7LQ9H0K6 701 aaKnown RBP5.89□□□□□ -1.47
LRCH3-211ENST00000466054 SLC5A4Q9NY91 659 aa5.89□□□□□ -1.47
LRCH3-211ENST00000466054 MAFO75444 373 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-211ENST00000466054 ABHD16AO95870 558 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 PRLP01236 227 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 MC4RP32245 332 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 STAT5BP51692 787 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 ROM1Q03395 351 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 KCNV1Q6PIU1 500 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 FRMD7Q6ZUT3 714 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 LHFPL2Q6ZUX7 228 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 C7orf31Q8N865 590 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 MAML3Q96JK9 1138 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 PUS7Q96PZ0 661 aaKnown RBP5.88□□□□□ -1.47
LRCH3-211ENST00000466054 AMNQ9BXJ7 453 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 UCKL1Q9NWZ5 548 aa5.88□□□□□ -1.47
LRCH3-211ENST00000466054 K7ESF4 209 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 PPFIA4O75335 1185 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 ECE1P42892 770 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 GUCY2FP51841 1108 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 MOGSQ13724 837 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 STILQ15468 1287 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 ELAVL1Q15717 326 aaKnown RBP5.87□□□□□ -1.47
LRCH3-211ENST00000466054 GRAMD4Q6IC98 578 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 TIGD7Q6NT04 549 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-211ENST00000466054 HDGFL2Q7Z4V5 671 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-211ENST00000466054 CLRN3Q8NCR9 226 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 RABGGTAQ92696 567 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 ERCC4Q92889 916 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-211ENST00000466054 LENG9Q96B70 501 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 OR10A5Q9H207 317 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 HOMER2Q9NSB8 354 aa5.87□□□□□ -1.47
LRCH3-211ENST00000466054 NOC2LQ9Y3T9 749 aaKnown RBP5.87□□□□□ -1.47
LRCH3-211ENST00000466054 GOLGA8BA8MQT2 603 aa5.86□□□□□ -1.47
LRCH3-211ENST00000466054 KRTAP10-9P60411 292 aa5.86□□□□□ -1.47
LRCH3-211ENST00000466054 ZNF362Q5T0B9 420 aaPredicted RBP5.86□□□□□ -1.47
LRCH3-211ENST00000466054 ESPNLQ6ZVH7 1005 aa5.86□□□□□ -1.47
LRCH3-211ENST00000466054 RTF1Q92541 710 aaKnown RBP5.86□□□□□ -1.47
LRCH3-211ENST00000466054 BBC3Q96PG8 261 aaPredicted RBP5.86□□□□□ -1.47
LRCH3-211ENST00000466054 TUBGCP5Q96RT8 1024 aa5.86□□□□□ -1.47
LRCH3-211ENST00000466054 WNT8AQ9H1J5 351 aa5.86□□□□□ -1.47
LRCH3-211ENST00000466054 KCNG1Q9UIX4 513 aa5.86□□□□□ -1.47
LRCH3-211ENST00000466054 MSRAQ9UJ68 235 aa5.86□□□□□ -1.47
LRCH3-211ENST00000466054 MAFGO15525 162 aa5.85□□□□□ -1.47
LRCH3-211ENST00000466054 B3GALT2O43825 422 aa5.85□□□□□ -1.47
LRCH3-211ENST00000466054 PRKD3O94806 890 aa5.85□□□□□ -1.47
LRCH3-211ENST00000466054 APEX1P27695 318 aaKnown RBP5.85□□□□□ -1.47
LRCH3-211ENST00000466054 SLC6A3Q01959 620 aa5.85□□□□□ -1.47
LRCH3-211ENST00000466054 RABL3Q5HYI8 236 aa5.85□□□□□ -1.47
LRCH3-211ENST00000466054 TMEM200BQ69YZ2 307 aa5.85□□□□□ -1.47
LRCH3-211ENST00000466054 SLFN12LQ6IEE8 588 aa5.85□□□□□ -1.47
LRCH3-211ENST00000466054 KANSL1Q7Z3B3 1105 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms