RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-209ENST00000465780 PRMT7Q9NVM4 692 aaPredicted RBP11.78□□□□□ -0.52
RBBP4-209ENST00000465780 RCOR1Q9UKL0 485 aa11.78□□□□□ -0.52
RBBP4-209ENST00000465780 RWDD3Q9Y3V2 267 aa11.78□□□□□ -0.52
RBBP4-209ENST00000465780 PHLPP2Q6ZVD8 1323 aa11.78□□□□□ -0.52
RBBP4-209ENST00000465780 ADGRA3Q8IWK6 1321 aa11.78□□□□□ -0.52
RBBP4-209ENST00000465780 COL6A3P12111 3177 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 PRRC2BQ5JSZ5 2229 aaKnown RBP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 TSPAN1O60635 241 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 HIP1RO75146 1068 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 ARHGEF15O94989 841 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 SLC34A2O95436 690 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 SSBP05455 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 HOXA11P31270 313 aaPredicted RBP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 KRT85P78386 507 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 DNM1Q05193 864 aaKnown RBP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 MAPK7Q13164 816 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 DMP1Q13316 513 aaPredicted RBP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 AMHR2Q16671 573 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 SPECC1Q5M775 1068 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 RRAGBQ5VZM2 374 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 TWF2Q6IBS0 349 aaKnown RBP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 NOTUMQ6P988 496 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 FIBCD1Q8N539 461 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 LARP4BQ92615 738 aaKnown RBP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 CLP1Q92989 425 aaKnown RBP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 FAM161BQ96MY7 647 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 CDX2Q99626 313 aaPredicted RBP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 FZD8Q9H461 694 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 ODF2LQ9ULJ1 636 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 STXBP5LQ9Y2K9 1186 aa11.77□□□□□ -0.53
RBBP4-209ENST00000465780 RBM19Q9Y4C8 960 aaKnown RBP11.77□□□□□ -0.53
RBBP4-209ENST00000465780 MYO7AQ13402 2215 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 ARF4P18085 180 aaPredicted RBP11.76□□□□□ -0.53
RBBP4-209ENST00000465780 SCP2P22307 547 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 CAMK2BQ13554 666 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 BTG3Q14201 252 aaPredicted RBP11.76□□□□□ -0.53
RBBP4-209ENST00000465780 MCM6Q14566 821 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 MAPK6Q16659 721 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 FOXD4L6Q3SYB3 417 aaPredicted RBP11.76□□□□□ -0.53
RBBP4-209ENST00000465780 ARSHQ5FYA8 562 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 AXDND1Q5T1B0 1012 aaPredicted RBP11.76□□□□□ -0.53
RBBP4-209ENST00000465780 FOXD4L3Q6VB84 417 aaPredicted RBP11.76□□□□□ -0.53
RBBP4-209ENST00000465780 MRPL10Q7Z7H8 261 aaKnown RBP11.76□□□□□ -0.53
RBBP4-209ENST00000465780 GPBP1Q86WP2 473 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 CNNM3Q8NE01 707 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 LRRC15Q8TF66 581 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 SPIRE2Q8WWL2 714 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 KCNN1Q92952 543 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 NTPCRQ9BSD7 190 aaKnown RBP11.76□□□□□ -0.53
RBBP4-209ENST00000465780 TMEM117Q9H0C3 514 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 CCDC113Q9H0I3 377 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 TMEM134Q9H6X4 195 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 FAM105AQ9NUU6 356 aa11.76□□□□□ -0.53
RBBP4-209ENST00000465780 ARIH1Q9Y4X5 557 aaPredicted RBP11.76□□□□□ -0.53
RBBP4-209ENST00000465780 KIAA1671Q9BY89 1806 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 A0A1B0GUA9 196 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 C5orf67F2Z3F1 127 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 H0YCG3 227 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 ACKR2O00590 384 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 PRKCBP05771 671 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 RB1P06400 928 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 LINC00271P0C7V0 271 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 PLS3P13797 630 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 ATF7P17544 494 aaPredicted RBP11.75□□□□□ -0.53
RBBP4-209ENST00000465780 POU3F3P20264 500 aaPredicted RBP11.75□□□□□ -0.53
RBBP4-209ENST00000465780 NPTX2P47972 431 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 ME1P48163 572 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 ZNF131P52739 623 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 SMTNP53814 917 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 PEX3P56589 373 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 NAALADL2Q58DX5 795 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 UBXN11Q5T124 520 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 PGBD4Q96DM1 585 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 GAS2L1Q99501 681 aaPredicted RBP11.75□□□□□ -0.53
RBBP4-209ENST00000465780 PLVAPQ9BX97 442 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 SCAND2PQ9GZW5 306 aaPredicted RBP11.75□□□□□ -0.53
RBBP4-209ENST00000465780 CUEDC2Q9H467 287 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 PRDM12Q9H4Q4 367 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 RNF19AQ9NV58 838 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 LARSQ9P2J5 1176 aaKnown RBP11.75□□□□□ -0.53
RBBP4-209ENST00000465780 ARHGAP28Q9P2N2 729 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 PCDHA7Q9UN72 937 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 CNTNAP2Q9UHC6 1331 aa11.75□□□□□ -0.53
RBBP4-209ENST00000465780 CARNS1A5YM72 827 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 CCDC169A6NNP5 214 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 TBKBP1A7MCY6 615 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 K7ERI5 159 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 N4BP3O15049 544 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 NCLP19338 710 aaKnown RBP11.74□□□□□ -0.53
RBBP4-209ENST00000465780 ABCD1P33897 745 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 BMPR1AP36894 532 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 STAT6P42226 847 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 PRPF4BQ13523 1007 aaKnown RBP11.74□□□□□ -0.53
RBBP4-209ENST00000465780 GIT2Q14161 759 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 EPC2Q52LR7 807 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 SLC27A1Q6PCB7 646 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 SHC4Q6S5L8 630 aa11.74□□□□□ -0.53
RBBP4-209ENST00000465780 SV2BQ7L1I2 683 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms