RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 BACH2Q9BYV9 841 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 NRDE2Q9H7Z3 1164 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 POLD4Q9HCU8 107 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 SPG21Q9NZD8 308 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 LZTS1Q9Y250 596 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 ARHGEF35A5YM69 484 aa24.16■■□□□ 1.46
LIME1-203ENST00000465591 ARF4P18085 180 aaPredicted RBP24.16■■□□□ 1.46
LIME1-203ENST00000465591 CDC25AP30304 524 aa24.16■■□□□ 1.46
LIME1-203ENST00000465591 RBM10P98175 930 aaKnown RBP24.16■■□□□ 1.46
LIME1-203ENST00000465591 PDIA5Q14554 519 aa24.16■■□□□ 1.46
LIME1-203ENST00000465591 PLPP4Q5VZY2 271 aa24.16■■□□□ 1.46
LIME1-203ENST00000465591 HAUS3Q68CZ6 603 aa24.16■■□□□ 1.46
LIME1-203ENST00000465591 EFHBQ8N7U6 833 aa24.16■■□□□ 1.46
LIME1-203ENST00000465591 MCPH1Q8NEM0 835 aa24.16■■□□□ 1.46
LIME1-203ENST00000465591 RNF39Q9H2S5 420 aa24.16■■□□□ 1.46
LIME1-203ENST00000465591 KIAA1024Q9UPX6 916 aa24.16■■□□□ 1.46
LIME1-203ENST00000465591 LRRIQ4A6NIV6 560 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 H3BQV1 296 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 ZC3H11AO75152 810 aaKnown RBP eCLIP24.15■■□□□ 1.46
LIME1-203ENST00000465591 CYP11B2P19099 503 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 MUTP22033 750 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 PPM1AP35813 382 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 RILPL1Q5EBL4 403 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 CDR2LQ86X02 465 aaPredicted RBP24.15■■□□□ 1.46
LIME1-203ENST00000465591 ZNF280BQ86YH2 543 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 FAM178BQ8IXR5 827 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 VN1R2Q8NFZ6 395 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 SNX29Q8TEQ0 813 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 BCL7CQ8WUZ0 217 aaPredicted RBP24.15■■□□□ 1.46
LIME1-203ENST00000465591 PGBD4Q96DM1 585 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 TCF25Q9BQ70 676 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 MMTAG2Q9BU76 263 aaKnown RBP24.15■■□□□ 1.46
LIME1-203ENST00000465591 RSAD1Q9HA92 442 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 DDX19AQ9NUU7 478 aaKnown RBP24.15■■□□□ 1.46
LIME1-203ENST00000465591 CLEC1BQ9P126 229 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 DNAJB4Q9UDY4 337 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 HES2Q9Y543 173 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 IPPQ9Y573 584 aa24.15■■□□□ 1.46
LIME1-203ENST00000465591 HIDE1A8MVS5 230 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 NCLP19338 710 aaKnown RBP24.14■■□□□ 1.45
LIME1-203ENST00000465591 AXLP30530 894 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 PRPHP41219 470 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 ATP2C1P98194 919 aaPredicted RBP24.14■■□□□ 1.45
LIME1-203ENST00000465591 CUL4AQ13619 759 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 PCBP1Q15365 356 aaKnown RBP eCLIP24.14■■□□□ 1.45
LIME1-203ENST00000465591 NOTUMQ6P988 496 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 KHSRPQ92945 711 aaKnown RBP eCLIP24.14■■□□□ 1.45
LIME1-203ENST00000465591 PPP2R3CQ969Q6 453 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 MSLNLQ96KJ4 702 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 CSRNP2Q9H175 543 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 BHMT2Q9H2M3 363 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 TLE6Q9H808 572 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.14■■□□□ 1.45
LIME1-203ENST00000465591 C5orf42Q9H799 3197 aa24.14■■□□□ 1.45
LIME1-203ENST00000465591 TTLL13PA6NNM8 815 aa24.13■■□□□ 1.45
LIME1-203ENST00000465591 LAD1O00515 517 aa24.13■■□□□ 1.45
LIME1-203ENST00000465591 DDHD2O94830 711 aa24.13■■□□□ 1.45
LIME1-203ENST00000465591 NDUFV1P49821 464 aa24.13■■□□□ 1.45
LIME1-203ENST00000465591 DUSP6Q16828 381 aa24.13■■□□□ 1.45
LIME1-203ENST00000465591 LARP1BQ659C4 914 aaKnown RBP24.13■■□□□ 1.45
LIME1-203ENST00000465591 CDCA2Q69YH5 1023 aaPredicted RBP24.13■■□□□ 1.45
LIME1-203ENST00000465591 GBP3Q9H0R5 595 aa24.13■■□□□ 1.45
LIME1-203ENST00000465591 PUF60Q9UHX1 559 aaKnown RBP24.13■■□□□ 1.45
LIME1-203ENST00000465591 BARX2Q9UMQ3 279 aaPredicted RBP24.13■■□□□ 1.45
LIME1-203ENST00000465591 TDRD15B5MCY1 1934 aaKnown RBP24.13■■□□□ 1.45
LIME1-203ENST00000465591 E9PMD0 336 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 MBTPS2O43462 519 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 GALTP07902 379 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 SLC11A1P49279 550 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 ALDH7A1P49419 539 aaKnown RBP24.12■■□□□ 1.45
LIME1-203ENST00000465591 KRT17Q04695 432 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 PUS10Q3MIT2 529 aaKnown RBP24.12■■□□□ 1.45
LIME1-203ENST00000465591 DTHD1Q6ZMT9 781 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 KCNK18Q7Z418 384 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 RSPH1Q8WYR4 309 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 CCDC51Q96ER9 411 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 NXF3Q9H4D5 531 aaKnown RBP24.12■■□□□ 1.45
LIME1-203ENST00000465591 ENTPD7Q9NQZ7 604 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 USP20Q9Y2K6 914 aa24.12■■□□□ 1.45
LIME1-203ENST00000465591 CNTNAP2Q9UHC6 1331 aa24.11■■□□□ 1.45
LIME1-203ENST00000465591 POMCP01189 267 aa24.11■■□□□ 1.45
LIME1-203ENST00000465591 EDN1P05305 212 aa24.11■■□□□ 1.45
LIME1-203ENST00000465591 ITGA4P13612 1032 aa24.11■■□□□ 1.45
LIME1-203ENST00000465591 RNASELQ05823 741 aaKnown RBP24.11■■□□□ 1.45
LIME1-203ENST00000465591 PDE12Q6L8Q7 609 aaKnown RBP24.11■■□□□ 1.45
LIME1-203ENST00000465591 KIFC3Q9BVG8 833 aa24.11■■□□□ 1.45
LIME1-203ENST00000465591 VN1R3Q9BXE9 311 aa24.11■■□□□ 1.45
LIME1-203ENST00000465591 RAB34Q9BZG1 259 aa24.11■■□□□ 1.45
LIME1-203ENST00000465591 FZD8Q9H461 694 aa24.11■■□□□ 1.45
LIME1-203ENST00000465591 CD207Q9UJ71 328 aa24.11■■□□□ 1.45
LIME1-203ENST00000465591 A0A1B0GUA9 196 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 KCNC3Q14003 757 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 PPP4R3CPQ6ZMV5 832 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 TMC7Q7Z402 723 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 CNNM3Q8NE01 707 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 URGCPQ8TCY9 931 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 TMEM169Q96HH4 297 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 IGSF21Q96ID5 467 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 GAD1Q99259 594 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 APOL6Q9BWW8 343 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms