RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 STC2O76061 302 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 CALRP27797 417 aaKnown RBP4.18□□□□□ -1.74
SNX4-202ENST00000465505 PTGS2P35354 604 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 FLT3P36888 993 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 NPEPPSP55786 919 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 NFE2L2Q16236 605 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 CFAP100Q494V2 611 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 KIAA1841Q6NSI8 718 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 CASC1Q6TDU7 716 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 RHOUQ7L0Q8 258 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 DNAJC10Q8IXB1 793 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 SLC25A43Q8WUT9 341 aaPredicted RBP4.18□□□□□ -1.74
SNX4-202ENST00000465505 ST8SIA2Q92186 375 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 LENG9Q96B70 501 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 PGBD4Q96DM1 585 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 TRIM44Q96DX7 344 aaPredicted RBP4.18□□□□□ -1.74
SNX4-202ENST00000465505 ENKD1Q9H0I2 346 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 POFUT1Q9H488 388 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 NCDNQ9UBB6 729 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 MAGEC2Q9UBF1 373 aaPredicted RBP4.18□□□□□ -1.74
SNX4-202ENST00000465505 RPS6KL1Q9Y6S9 549 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 OPHN1O60890 802 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 IPO13O94829 963 aaKnown RBP4.17□□□□□ -1.74
SNX4-202ENST00000465505 FSBPO95073 299 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 APOL3O95236 402 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 GAAP10253 952 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 ATP2A2P16615 1042 aaKnown RBP4.17□□□□□ -1.74
SNX4-202ENST00000465505 TGM1P22735 817 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 NR4A1P22736 598 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 PABPC4Q13310 644 aaKnown RBP eCLIP4.17□□□□□ -1.74
SNX4-202ENST00000465505 BMS1Q14692 1282 aaKnown RBP4.17□□□□□ -1.74
SNX4-202ENST00000465505 MAN2A1Q16706 1144 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 CCDC96Q2M329 555 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 CCDC181Q5TID7 509 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 APBB1IPQ7Z5R6 666 aaPredicted RBP4.17□□□□□ -1.74
SNX4-202ENST00000465505 ZZZ3Q8IYH5 903 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 ZNF276Q8N554 614 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 C7orf31Q8N865 590 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 MB21D1Q8N884 522 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 SH3TC2Q8TF17 1288 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 ARL8AQ96BM9 186 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 NOL10Q9BSC4 688 aaKnown RBP4.17□□□□□ -1.74
SNX4-202ENST00000465505 ZMAT4Q9H898 229 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 TOMM22Q9NS69 142 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 ING3Q9NXR8 418 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 H2AFY2Q9P0M6 372 aaPredicted RBP4.17□□□□□ -1.74
SNX4-202ENST00000465505 FZD1Q9UP38 647 aa4.17□□□□□ -1.74
SNX4-202ENST00000465505 FAM83GA6ND36 823 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 ELL2O00472 640 aaPredicted RBP4.16□□□□□ -1.74
SNX4-202ENST00000465505 HOXA3O43365 443 aaPredicted RBP4.16□□□□□ -1.74
SNX4-202ENST00000465505 PPFIA4O75335 1185 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 ASMTLO95671 621 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 F2P00734 622 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 PROZP22891 400 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 KRTAP1-1Q07627 177 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 LONRF3Q496Y0 759 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 MBNL2Q5VZF2 373 aaKnown RBP4.16□□□□□ -1.74
SNX4-202ENST00000465505 CLEC4GQ6UXB4 293 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 KRBA2Q6ZNG9 492 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 KIF18BQ86Y91 864 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 VRK3Q8IV63 474 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 FAM9BQ8IZU0 186 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 MORC4Q8TE76 937 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 SREK1Q8WXA9 508 aaKnown RBP4.16□□□□□ -1.74
SNX4-202ENST00000465505 UIMC1Q96RL1 719 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 TSPAN18Q96SJ8 248 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 MAF1Q9H063 256 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 INTS7Q9NVH2 962 aaKnown RBP4.16□□□□□ -1.74
SNX4-202ENST00000465505 IFT57Q9NWB7 429 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 TMEM260Q9NX78 707 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 MYPNQ86TC9 1320 aa4.16□□□□□ -1.74
SNX4-202ENST00000465505 EIF3JO75822 258 aaKnown RBP4.15□□□□□ -1.75
SNX4-202ENST00000465505 CFBP00751 764 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 GCP02774 474 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 GNAT2P19087 354 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 HK1P19367 917 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 PTTG1IPP53801 180 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 CD69Q07108 199 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 FSTL1Q12841 308 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 LRRC32Q14392 662 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 FAM214AQ32MH5 1076 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 DCAF17Q5H9S7 520 aaPredicted RBP4.15□□□□□ -1.75
SNX4-202ENST00000465505 CXorf67Q86X51 503 aaPredicted RBP4.15□□□□□ -1.75
SNX4-202ENST00000465505 NXPE1Q8N323 547 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 PIK3C3Q8NEB9 887 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 GPR150Q8NGU9 434 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 ANP32BQ92688 251 aaKnown RBP4.15□□□□□ -1.75
SNX4-202ENST00000465505 MRFAP1L1Q96HT8 127 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 ZNF496Q96IT1 587 aaPredicted RBP4.15□□□□□ -1.75
SNX4-202ENST00000465505 HIST1H2AHQ96KK5 128 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 HIST1H2AJQ99878 128 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 MLST8Q9BVC4 326 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 MTFR1LQ9H019 292 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 ZKSCAN5Q9Y2L8 839 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 DCAF1Q9Y4B6 1507 aa4.15□□□□□ -1.75
SNX4-202ENST00000465505 COL4A3Q01955 1670 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 TGM5O43548 720 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 ALDH1A2O94788 518 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 PCDH8O95206 1070 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 LY86O95711 162 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms