RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 SPATA31C2B4DYI2 1134 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 SLC16A3O15427 465 aaKnown RBP9.08□□□□□ -0.96
UBE4B-205ENST00000465408 NDUFA10O95299 355 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 ABL1P00519 1130 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 TUBB4AP04350 444 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 EPB41P11171 864 aaKnown RBP9.08□□□□□ -0.96
UBE4B-205ENST00000465408 CASQ1P31415 396 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 SFNP31947 248 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 SSTR3P32745 418 aaPredicted RBP9.08□□□□□ -0.96
UBE4B-205ENST00000465408 ARHGAP25P42331 645 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 CYP2J2P51589 502 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 HERVK_113P62684 666 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 KCNH2Q12809 1159 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 NAA30Q147X3 362 aaPredicted RBP9.08□□□□□ -0.96
UBE4B-205ENST00000465408 MEA1Q16626 185 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 DCAF17Q5H9S7 520 aaPredicted RBP9.08□□□□□ -0.96
UBE4B-205ENST00000465408 ZNF746Q6NUN9 644 aaPredicted RBP9.08□□□□□ -0.96
UBE4B-205ENST00000465408 PDXDC1Q6P996 788 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 STXBP4Q6ZWJ1 553 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 RRAGAQ7L523 313 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 ZNF720Q7Z2F6 126 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 FRMD5Q7Z6J6 570 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 RIOX2Q8IUF8 465 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 C4orf19Q8IY42 314 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 BAP1Q92560 729 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 IQCDQ96DY2 449 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 SPATC1LQ9H0A9 340 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 NLRC4Q9NPP4 1024 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 ARMCX3Q9UH62 379 aaPredicted RBP9.08□□□□□ -0.96
UBE4B-205ENST00000465408 TFR2Q9UP52 801 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 YBX2Q9Y2T7 364 aaKnown RBP9.08□□□□□ -0.96
UBE4B-205ENST00000465408 PCDHB13Q9Y5F0 798 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 MTCH2Q9Y6C9 303 aa9.08□□□□□ -0.96
UBE4B-205ENST00000465408 COL11A1P12107 1806 aaPredicted RBP9.08□□□□□ -0.96
UBE4B-205ENST00000465408 WDR87Q6ZQQ6 2873 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 VPS13AQ96RL7 3174 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 DNM1LO00429 736 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 CXCL11O14625 94 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 CTIFO43310 598 aaKnown RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 KIF5CO60282 957 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 ZNF862O60290 1169 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 URI1O94763 535 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 NOL4O94818 638 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 SLU7O95391 586 aaKnown RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 AFPP02771 609 aaKnown RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 PLEKP08567 350 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 HOXB3P14651 431 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 RPL13P26373 211 aaKnown RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 CYLC1P35663 651 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 ALDH5A1P51649 535 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 ACTR2P61160 394 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 SNX17Q15036 470 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 STXBP2Q15833 593 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 FAM110CQ1W6H9 321 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 GNPTABQ3T906 1256 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 ARHGAP29Q52LW3 1261 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 FAM102BQ5T8I3 360 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 TCERG1LQ5VWI1 586 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 SWSAP1Q6NVH7 229 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 SEPT14Q6ZU15 432 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 CACNA2D4Q7Z3S7 1137 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 CCDC60Q8IWA6 550 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 FAM186BQ8IYM0 893 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 SYCP3Q8IZU3 236 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 ZNF710Q8N1W2 664 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 PROCA1Q8NCQ7 364 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 LRRN4CLQ8ND94 238 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 RDM1Q8NG50 284 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 SENP7Q9BQF6 1050 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 GANQ9H2C0 597 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 NHEJ1Q9H9Q4 299 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 SLC28A3Q9HAS3 691 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 JPH1Q9HDC5 661 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 AGPAT3Q9NRZ7 376 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 IGSF5Q9NSI5 407 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 ANKEF1Q9NU02 776 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 SLC9A2Q9UBY0 812 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 TRIM10Q9UDY6 481 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 FBXO40Q9UH90 709 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 ZNF215Q9UL58 517 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 FAM184BQ9ULE4 1060 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 AGTPBP1Q9UPW5 1226 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 PCDHA10Q9Y5I2 948 aa9.07□□□□□ -0.96
UBE4B-205ENST00000465408 V9GYY5 206 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-205ENST00000465408 NFASCO94856 1347 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 TISP43B9A030 160 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 RFXAPO00287 272 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 MAFGO15525 162 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 PPP1R37O75864 691 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 STBD1O95210 358 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 PSAPP07602 524 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 SUPT20HL2P0C7V6 817 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 ACTN1P12814 892 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 PLS3P13797 630 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 EIF4A3P38919 411 aaKnown RBP9.06□□□□□ -0.96
UBE4B-205ENST00000465408 PEX3P56589 373 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 POLR2FP61218 127 aaKnown RBP9.06□□□□□ -0.96
UBE4B-205ENST00000465408 SP2Q02086 613 aa9.06□□□□□ -0.96
UBE4B-205ENST00000465408 PRKCEQ02156 737 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms