RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 ATP2C1P98194 919 aaPredicted RBP13.5□□□□□ -0.25
XRN1-204ENST00000465074 KRT17Q04695 432 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 HYAL1Q12794 435 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 CAMK1Q14012 370 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 CSPP1Q1MSJ5 1256 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 NOMO2Q5JPE7 1267 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 NOTUMQ6P988 496 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 ADGRD2Q7Z7M1 963 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 DEPTORQ8TB45 409 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 URGCPQ8TCY9 931 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 PPP2R3CQ969Q6 453 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 IFT74Q96LB3 600 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 UHRF1Q96T88 793 aaPredicted RBP13.5□□□□□ -0.25
XRN1-204ENST00000465074 MRPL9Q9BYD2 267 aaKnown RBP13.5□□□□□ -0.25
XRN1-204ENST00000465074 ENTPD7Q9NQZ7 604 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 TLR9Q9NR96 1032 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 SPG21Q9NZD8 308 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 PUF60Q9UHX1 559 aaKnown RBP13.5□□□□□ -0.25
XRN1-204ENST00000465074 HES2Q9Y543 173 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 PER2O15055 1255 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 LINC01565O15544 149 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 OFD1O75665 1012 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 NPTXRO95502 500 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 POMCP01189 267 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 HSP90AA1P07900 732 aaKnown RBP13.49□□□□□ -0.25
XRN1-204ENST00000465074 BMP1P13497 986 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 ARF4P18085 180 aaPredicted RBP13.49□□□□□ -0.25
XRN1-204ENST00000465074 MUTP22033 750 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 BCAR1P56945 870 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 ERVFC1P60507 584 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 CEBPZQ03701 1054 aaKnown RBP13.49□□□□□ -0.25
XRN1-204ENST00000465074 RAD51AP2Q09MP3 1159 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 UBXN11Q5T124 520 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 PLPP4Q5VZY2 271 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 AGMOQ6ZNB7 445 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 BRAPQ7Z569 592 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 RASSF8Q8NHQ8 419 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 BSNDQ8WZ55 320 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 FAM193BQ96PV7 902 aaPredicted RBP13.49□□□□□ -0.25
XRN1-204ENST00000465074 TRAIPQ9BWF2 469 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 CSRNP2Q9H175 543 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 TLE6Q9H808 572 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 RSAD1Q9HA92 442 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 USP20Q9Y2K6 914 aa13.49□□□□□ -0.25
XRN1-204ENST00000465074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.48□□□□□ -0.25
XRN1-204ENST00000465074 CCDC169A6NNP5 214 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 HAX1O00165 279 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 ZNF623O75123 536 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 EYA4O95677 639 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 SYT1P21579 422 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 AXLP30530 894 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 PPM1AP35813 382 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 NDUFV1P49821 464 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 AFF1P51825 1210 aaKnown RBP13.48□□□□□ -0.25
XRN1-204ENST00000465074 POU5F1BQ06416 359 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 DHX8Q14562 1220 aaKnown RBP13.48□□□□□ -0.25
XRN1-204ENST00000465074 PPP2R5AQ15172 486 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
XRN1-204ENST00000465074 FAM173BQ6P4H8 233 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 TMC7Q7Z402 723 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 KCNK18Q7Z418 384 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 MRPL10Q7Z7H8 261 aaKnown RBP13.48□□□□□ -0.25
XRN1-204ENST00000465074 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
XRN1-204ENST00000465074 PABPC5Q96DU9 382 aaKnown RBP13.48□□□□□ -0.25
XRN1-204ENST00000465074 TCF25Q9BQ70 676 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 MMTAG2Q9BU76 263 aaKnown RBP13.48□□□□□ -0.25
XRN1-204ENST00000465074 KIFC3Q9BVG8 833 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 TBC1D13Q9NVG8 400 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 KLK14Q9P0G3 267 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 DNAJB4Q9UDY4 337 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 IPPQ9Y573 584 aa13.48□□□□□ -0.25
XRN1-204ENST00000465074 SFI1A8K8P3 1242 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 PRKCBP05771 671 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 AKAP5P24588 427 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 UBA7P41226 1012 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 PEX3P56589 373 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 UBE3AQ05086 875 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 PRPF4BQ13523 1007 aaKnown RBP13.47□□□□□ -0.25
XRN1-204ENST00000465074 PCBP1Q15365 356 aaKnown RBP eCLIP13.47□□□□□ -0.25
XRN1-204ENST00000465074 MAPK6Q16659 721 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 AMHR2Q16671 573 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 FOXD4L5Q5VV16 416 aaPredicted RBP13.47□□□□□ -0.25
XRN1-204ENST00000465074 PTCRAQ6ISU1 281 aaPredicted RBP13.47□□□□□ -0.25
XRN1-204ENST00000465074 CABP7Q86V35 215 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 ZNF280BQ86YH2 543 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
XRN1-204ENST00000465074 HSCBQ8IWL3 235 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 HACE1Q8IYU2 909 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 TMEM87AQ8NBN3 555 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 SMG8Q8ND04 991 aaKnown RBP13.47□□□□□ -0.25
XRN1-204ENST00000465074 CNNM3Q8NE01 707 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.47□□□□□ -0.25
XRN1-204ENST00000465074 FOXD4L4Q8WXT5 416 aaPredicted RBP13.47□□□□□ -0.25
XRN1-204ENST00000465074 KIFAP3Q92845 792 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 GAD1Q99259 594 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 RUSC1Q9BVN2 902 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 C2orf40Q9H1Z8 148 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 NXF3Q9H4D5 531 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms