RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 HACE1Q8IYU2 909 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 HVCN1Q96D96 273 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 CCDC34Q96HJ3 373 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 SAMD11Q96NU1 681 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 YME1L1Q96TA2 773 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 OLFML3Q9NRN5 406 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 LRFN2Q9ULH4 789 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 RWDD3Q9Y3V2 267 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 PCDHB7Q9Y5E2 793 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 GBF1Q92538 1859 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 ADGRA3Q8IWK6 1321 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 K7ERI5 159 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 PRKCBP05771 671 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 PFKFB1P16118 471 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 PRPF4BQ13523 1007 aaKnown RBP15.1■□□□□ 0.01
LIMD1-203ENST00000465039 ALCAMQ13740 583 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 SLC27A1Q6PCB7 646 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 ZPBP2Q6X784 338 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 ECHDC2Q86YB7 292 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 PDILTQ8N807 584 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 TMEM87AQ8NBN3 555 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 TMEM161BQ8NDZ6 487 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 MRPS27Q92552 414 aaKnown RBP15.1■□□□□ 0.01
LIMD1-203ENST00000465039 DDX12PQ92771 950 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 ZNF689Q96CS4 500 aaPredicted RBP15.1■□□□□ 0.01
LIMD1-203ENST00000465039 DNAJC19Q96DA6 116 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 PGBD4Q96DM1 585 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 ZNF668Q96K58 619 aaPredicted RBP15.1■□□□□ 0.01
LIMD1-203ENST00000465039 SLC28A3Q9HAS3 691 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 UBN1Q9NPG3 1134 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 TSHZ2Q9NRE2 1034 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 FAM105AQ9NUU6 356 aa15.1■□□□□ 0.01
LIMD1-203ENST00000465039 GOLGA6L4A6NEF3 574 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 CCDC169A6NNP5 214 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 N4BP3O15049 544 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 POLR2DO15514 142 aaKnown RBP15.09■□□□□ 0.01
LIMD1-203ENST00000465039 CSDE1O75534 798 aaKnown RBP15.09■□□□□ 0.01
LIMD1-203ENST00000465039 ARF4P18085 180 aaPredicted RBP15.09■□□□□ 0.01
LIMD1-203ENST00000465039 STRN3Q13033 797 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 ZNF697Q5TEC3 545 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 CLEC17AQ6ZS10 378 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 MRPL10Q7Z7H8 261 aaKnown RBP15.09■□□□□ 0.01
LIMD1-203ENST00000465039 CEP57L1Q8IYX8 460 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 DHX58Q96C10 678 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 ADPGKQ9BRR6 497 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 MRPL9Q9BYD2 267 aaKnown RBP15.09■□□□□ 0.01
LIMD1-203ENST00000465039 MRPL4Q9BYD3 311 aaKnown RBP15.09■□□□□ 0.01
LIMD1-203ENST00000465039 TRIM9Q9C026 710 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 TMEM117Q9H0C3 514 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 RALGAPA2Q2PPJ7 1873 aa15.09■□□□□ 0.01
LIMD1-203ENST00000465039 MYMKA6NI61 221 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 GRXCR1A8MXD5 290 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 INPPL1O15357 1258 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 TRAK2O60296 914 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 PIGRP01833 764 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 CA3P07451 260 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 FGFR4P22455 802 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 SYKP43405 635 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 DCAF4L1Q3SXM0 396 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 PPP2R2DQ66LE6 453 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 FAM178BQ8IXR5 827 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 CCDC65Q8IXS2 484 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 MYCT1Q8N699 235 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 CLP1Q92989 425 aaKnown RBP15.08■□□□□ 0
LIMD1-203ENST00000465039 C7orf25Q9BPX7 421 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 TNFSF13BQ9Y275 285 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 YBX2Q9Y2T7 364 aaKnown RBP15.08■□□□□ 0
LIMD1-203ENST00000465039 PCDHB2Q9Y5E7 798 aa15.08■□□□□ 0
LIMD1-203ENST00000465039 PVALEFA0A1B0GWK0 134 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 ACTN4O43707 911 aaKnown RBP15.07■□□□□ 0
LIMD1-203ENST00000465039 ATF7P17544 494 aaPredicted RBP15.07■□□□□ 0
LIMD1-203ENST00000465039 PBX2P40425 430 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 GTF2BQ00403 316 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 RAD51AP2Q09MP3 1159 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 DHX8Q14562 1220 aaKnown RBP15.07■□□□□ 0
LIMD1-203ENST00000465039 UBXN11Q5T124 520 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 KANK3Q6NY19 840 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 GLB1LQ6UWU2 654 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 STXBP4Q6ZWJ1 553 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 HAUS6Q7Z4H7 955 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 ABI1Q8IZP0 508 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 LRRC43Q8N309 656 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 LRCH3Q96II8 777 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 FIZ1Q96SL8 496 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 KIFC3Q9BVG8 833 aa15.07■□□□□ 0
LIMD1-203ENST00000465039 FNDC1Q4ZHG4 1894 aaPredicted RBP15.06■□□□□ 0
LIMD1-203ENST00000465039 NPHP3-ACAD11A0A0J9YXS1 232 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 LINC01553A4QN01 128 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 K7ENM7 598 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 SLC16A4O15374 487 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 B4GALT5O43286 388 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 TOM1L1O75674 476 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 UPP2O95045 317 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 PROZP22891 400 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 RABGGTBP53611 331 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 ERVK-21P61565 698 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 TAP1Q03518 808 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 BTG3Q14201 252 aaPredicted RBP15.06■□□□□ 0
LIMD1-203ENST00000465039 KYAT1Q16773 422 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms