RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MMGT1Q8N4V1 131 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 RAB3IPQ96QF0 476 aaPredicted RBP9.71□□□□□ -0.85
HPS4-208ENST00000464362 MRPL47Q9HD33 250 aaKnown RBP9.71□□□□□ -0.85
HPS4-208ENST00000464362 KLC4Q9NSK0 619 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 IVNS1ABPQ9Y6Y0 642 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 C3P01024 1663 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 GRID2IPA4D2P6 1211 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 PIK3R2O00459 728 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 POLD1P28340 1107 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 HSD17B3P37058 310 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 KRT17Q04695 432 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 CCDC14Q49A88 953 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 NT5DC1Q5TFE4 455 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 OR6B2Q6IFH4 312 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 CCNYQ8ND76 341 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 CFAP36Q96G28 342 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 RUSC1Q9BVN2 902 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 HESX1Q9UBX0 185 aa9.71□□□□□ -0.85
HPS4-208ENST00000464362 OVOS2A0A0G2JMS6 1433 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 GPS1Q13098 491 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 ELOA2Q8IYF1 753 aaPredicted RBP9.71□□□□□ -0.86
HPS4-208ENST00000464362 ARHGAP24Q8N264 748 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 KCTD6Q8NC69 237 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 BBOF1Q8ND07 529 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 RAB3IL1Q8TBN0 382 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 THAP2Q9H0W7 228 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 SLITRK6Q9H5Y7 841 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 PRR12Q9ULL5 1215 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 HEY1Q9Y5J3 304 aa9.71□□□□□ -0.86
HPS4-208ENST00000464362 TLR3O15455 904 aaKnown RBP9.7□□□□□ -0.86
HPS4-208ENST00000464362 AKAP3O75969 853 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 COMTP21964 271 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 SCP2P22307 547 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 PPP2R5AQ15172 486 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 ARMC9Q7Z3E5 817 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 PODNQ7Z5L7 613 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 SMC1BQ8NDV3 1235 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 SPIRE2Q8WWL2 714 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 CFAP57Q96MR6 1250 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 KLF6Q99612 283 aaPredicted RBP9.7□□□□□ -0.86
HPS4-208ENST00000464362 ZNF277Q9NRM2 450 aaPredicted RBP9.7□□□□□ -0.86
HPS4-208ENST00000464362 APEX2Q9UBZ4 518 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 ASNSP08243 561 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 PDHA1P08559 390 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 NBPF9Q3BBW0 867 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 MUM1L1Q5H9M0 696 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 JAMLQ86YT9 394 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 ANKMY2Q8IV38 441 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 PDIK1LQ8N165 341 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 C4orf33Q8N1A6 199 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 TGS1Q96RS0 853 aaKnown RBP9.7□□□□□ -0.86
HPS4-208ENST00000464362 GPRC5CQ9NQ84 441 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 NRXN3Q9Y4C0 1643 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 GPR75-ASB3A0A0A6YYF3 556 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 FOXN3O00409 490 aaPredicted RBP9.7□□□□□ -0.86
HPS4-208ENST00000464362 CAPN9O14815 690 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 OPHN1O60890 802 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 TOM1L1O75674 476 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 P4HBP07237 508 aaKnown RBP9.7□□□□□ -0.86
HPS4-208ENST00000464362 KITP10721 976 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 CORO7P57737 925 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 IL17AQ16552 155 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 RASIP1Q5U651 963 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 KRT39Q6A163 491 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 PPP1R18Q6NYC8 613 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 EPM2AIP1Q7L775 607 aaPredicted RBP9.7□□□□□ -0.86
HPS4-208ENST00000464362 ZNF571Q7Z3V5 609 aaPredicted RBP9.7□□□□□ -0.86
HPS4-208ENST00000464362 ERICH1Q86X53 443 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 ZBED8Q8IZ13 594 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 TSEN2Q8NCE0 465 aaKnown RBP9.7□□□□□ -0.86
HPS4-208ENST00000464362 SCFD1Q8WVM8 642 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 ATG4AQ8WYN0 398 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 ATP2A3Q93084 1043 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 CYFIP2Q96F07 1278 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 TLR10Q9BXR5 811 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 PSD3Q9NYI0 1048 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.7□□□□□ -0.86
HPS4-208ENST00000464362 ZBTB39O15060 712 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 MCF2LO15068 1137 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 PSMA2P25787 234 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 CHRNA3P32297 505 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 SERPINB6P35237 376 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
HPS4-208ENST00000464362 KIF22Q14807 665 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 PRAMEF18Q5VWM3 479 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 KRT27Q7Z3Y8 459 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 MASTLQ96GX5 879 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 NRBP2Q9NSY0 501 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 FGFR1OP2Q9NVK5 253 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 AKT3Q9Y243 479 aa9.7□□□□□ -0.86
HPS4-208ENST00000464362 ECE1P42892 770 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 IZUMO3Q5VZ72 239 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 FBXO25Q8TCJ0 367 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 ACSF2Q96CM8 615 aaPredicted RBP9.69□□□□□ -0.86
HPS4-208ENST00000464362 STK33Q9BYT3 514 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 TMEM51Q9NW97 253 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 FIS1Q9Y3D6 152 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 A0A1W2PQJ5 194 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 WDR64B1ANS9 1081 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms