RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 RALGAPA2Q2PPJ7 1873 aa17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 SPRED2Q7Z698 418 aa17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 SPIRE2Q8WWL2 714 aa17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PRIMPOLQ96LW4 560 aa17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 TMEM134Q9H6X4 195 aa17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 FAM105AQ9NUU6 356 aa17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 ARHGAP28Q9P2N2 729 aa17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 KCNG1Q9UIX4 513 aa17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CIZ1Q9ULV3 898 aaPredicted RBP17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
RAB11FIP3-208ENST00000464263 KIAA1671Q9BY89 1806 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 MYMKA6NI61 221 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 K7ERI5 159 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 ACKR2O00590 384 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 EDN1P05305 212 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PRKCBP05771 671 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 LINC00271P0C7V0 271 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 FGFR1P11362 822 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CMA1P23946 247 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 ZNF131P52739 623 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 ERVK-21P61565 698 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 MAPK6Q16659 721 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 NOTUMQ6P988 496 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 MRPL10Q7Z7H8 261 aaKnown RBP16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CMTR2Q8IYT2 770 aaKnown RBP16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 DNAJC19Q96DA6 116 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CCDC51Q96ER9 411 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 GUCD1Q96NT3 240 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 KMT5AQ9NQR1 393 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 FAM13BQ9NYF5 915 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 USP20Q9Y2K6 914 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PCDHB2Q9Y5E7 798 aa16.99■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CNTNAP2Q9UHC6 1331 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 SLC16A4O15374 487 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 POLR2DO15514 142 aaKnown RBP16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 KRT18P05783 430 aaKnown RBP16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 RAB27AP51159 221 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 BTG3Q14201 252 aaPredicted RBP16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 NT5DC1Q5TFE4 455 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 TAS1R3Q7RTX0 852 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 FIBCD1Q8N539 461 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 IQUBQ8NA54 791 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 TMEM161BQ8NDZ6 487 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 DDX12PQ92771 950 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 KCNN1Q92952 543 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 DHX58Q96C10 678 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CASD1Q96PB1 797 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 TGS1Q96RS0 853 aaKnown RBP16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CDX2Q99626 313 aaPredicted RBP16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 EIF2AQ9BY44 585 aaKnown RBP16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CERS4Q9HA82 394 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 GDPD2Q9HCC8 539 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 KBTBD4Q9NVX7 518 aa16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 LARSQ9P2J5 1176 aaKnown RBP16.98■□□□□ 0.31
RAB11FIP3-208ENST00000464263 FAM13AO94988 1023 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 SMTNP53814 917 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 NCKAP1LP55160 1127 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PRPF4BQ13523 1007 aaKnown RBP16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CLLU1OSQ5K130 101 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 DYMQ7RTS9 669 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CDR2LQ86X02 465 aaPredicted RBP16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 MYCT1Q8N699 235 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 RNF169Q8NCN4 708 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 SMG8Q8ND04 991 aaKnown RBP16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CLP1Q92989 425 aaKnown RBP16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 LPPQ93052 612 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 FIZ1Q96SL8 496 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 C17orf80Q9BSJ5 609 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 TMEM117Q9H0C3 514 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CUEDC2Q9H467 287 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PRDM12Q9H4Q4 367 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PARVGQ9HBI0 331 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 KCNH3Q9ULD8 1083 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 HPSEQ9Y251 543 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CDH23Q9H251 3354 aa16.97■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PHLPP2Q6ZVD8 1323 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 FAM237AA0A1B0GTK4 181 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 A0A1B0GVL5 298 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 EPOPA6NHQ4 379 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 TBKBP1A7MCY6 615 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 HOXA2O43364 376 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 MAPTP10636 758 aaKnown RBP16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 LIG1P18858 919 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 LONRF3Q496Y0 759 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PAN2Q504Q3 1202 aaKnown RBP16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 SLC27A1Q6PCB7 646 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 LRRC55Q6ZSA7 311 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 CNNM3Q8NE01 707 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 ARNTL2Q8WYA1 636 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 STAMQ92783 540 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PGBD4Q96DM1 585 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 TNMDQ9H2S6 317 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 PDZD7Q9H5P4 517 aa16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 MRPL42Q9Y6G3 142 aaKnown RBP16.96■□□□□ 0.31
RAB11FIP3-208ENST00000464263 A0A1W2PQ27 194 aa16.95■□□□□ 0.3
RAB11FIP3-208ENST00000464263 A0A1W2PQ64 194 aa16.95■□□□□ 0.3
RAB11FIP3-208ENST00000464263 A0A1W2PQD8 194 aa16.95■□□□□ 0.3
RAB11FIP3-208ENST00000464263 RFXAPO00287 272 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms