RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 CPB2Q96IY4 423 aa28.87■■■□□ 2.21
SURF1-203ENST00000463965 TRIM6Q9C030 488 aaPredicted RBP28.87■■■□□ 2.21
SURF1-203ENST00000463965 FZD8Q9H461 694 aa28.87■■■□□ 2.21
SURF1-203ENST00000463965 KMT5AQ9NQR1 393 aa28.87■■■□□ 2.21
SURF1-203ENST00000463965 ODF2LQ9ULJ1 636 aa28.87■■■□□ 2.21
SURF1-203ENST00000463965 K7ERI5 159 aa28.86■■■□□ 2.21
SURF1-203ENST00000463965 GTPBP6O43824 516 aaPredicted RBP28.86■■■□□ 2.21
SURF1-203ENST00000463965 PRKCBP05771 671 aa28.86■■■□□ 2.21
SURF1-203ENST00000463965 PLS3P13797 630 aa28.86■■■□□ 2.21
SURF1-203ENST00000463965 ARF4P18085 180 aaPredicted RBP28.86■■■□□ 2.21
SURF1-203ENST00000463965 IGFBP4P22692 258 aa28.86■■■□□ 2.21
SURF1-203ENST00000463965 STAT6P42226 847 aa28.86■■■□□ 2.21
SURF1-203ENST00000463965 PRPF4BQ13523 1007 aaKnown RBP28.86■■■□□ 2.21
SURF1-203ENST00000463965 EPC2Q52LR7 807 aa28.86■■■□□ 2.21
SURF1-203ENST00000463965 SPOUT1Q5T280 376 aaKnown RBP28.86■■■□□ 2.21
SURF1-203ENST00000463965 SPRED2Q7Z698 418 aa28.86■■■□□ 2.21
SURF1-203ENST00000463965 CLP1Q92989 425 aaKnown RBP28.86■■■□□ 2.21
SURF1-203ENST00000463965 LARSQ9P2J5 1176 aaKnown RBP28.86■■■□□ 2.21
SURF1-203ENST00000463965 RCOR1Q9UKL0 485 aa28.86■■■□□ 2.21
SURF1-203ENST00000463965 SFI1A8K8P3 1242 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 ACKR2O00590 384 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 RB1P06400 928 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 CTNNB1P35222 781 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 MAPK7Q13164 816 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 ARSHQ5FYA8 562 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 SV2BQ7L1I2 683 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 HACE1Q8IYU2 909 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 LRRC15Q8TF66 581 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 KIFC3Q9BVG8 833 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 PANK2Q9BZ23 570 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 AAASQ9NRG9 546 aa28.85■■■□□ 2.21
SURF1-203ENST00000463965 MRPL42Q9Y6G3 142 aaKnown RBP28.85■■■□□ 2.21
SURF1-203ENST00000463965 B4GALT5O43286 388 aa28.84■■■□□ 2.21
SURF1-203ENST00000463965 FAM13AO94988 1023 aa28.84■■■□□ 2.21
SURF1-203ENST00000463965 ATF7P17544 494 aaPredicted RBP28.84■■■□□ 2.21
SURF1-203ENST00000463965 BMPR1AP36894 532 aa28.84■■■□□ 2.21
SURF1-203ENST00000463965 GLB1LQ6UWU2 654 aa28.84■■■□□ 2.21
SURF1-203ENST00000463965 SPIRE2Q8WWL2 714 aa28.84■■■□□ 2.21
SURF1-203ENST00000463965 CNTNAP2Q9UHC6 1331 aa28.84■■■□□ 2.21
SURF1-203ENST00000463965 NPHP3-ACAD11A0A0J9YXS1 232 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 A0A1B0GUA9 196 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 EPOPA6NHQ4 379 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 H0YCG3 227 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 RFXAPO00287 272 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 N4BP3O15049 544 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 TBCAO75347 108 aaKnown RBP28.83■■■□□ 2.21
SURF1-203ENST00000463965 UBXN11Q5T124 520 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 SLC27A1Q6PCB7 646 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 MRPL10Q7Z7H8 261 aaKnown RBP28.83■■■□□ 2.21
SURF1-203ENST00000463965 PDILTQ8N807 584 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 HELQQ8TDG4 1101 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 SPATA32Q96LK8 384 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 CASD1Q96PB1 797 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 REEP2Q9BRK0 252 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 NTPCRQ9BSD7 190 aaKnown RBP28.83■■■□□ 2.21
SURF1-203ENST00000463965 PLVAPQ9BX97 442 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 MRPL9Q9BYD2 267 aaKnown RBP28.83■■■□□ 2.21
SURF1-203ENST00000463965 CCDC113Q9H0I3 377 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 TMEM134Q9H6X4 195 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 UBN1Q9NPG3 1134 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 FAM13BQ9NYF5 915 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 PCDHA7Q9UN72 937 aa28.83■■■□□ 2.21
SURF1-203ENST00000463965 ANP32AP39687 249 aaKnown RBP28.82■■■□□ 2.2
SURF1-203ENST00000463965 CLLU1OSQ5K130 101 aa28.82■■■□□ 2.2
SURF1-203ENST00000463965 APBB1IPQ7Z5R6 666 aaPredicted RBP28.82■■■□□ 2.2
SURF1-203ENST00000463965 LRRC43Q8N309 656 aa28.82■■■□□ 2.2
SURF1-203ENST00000463965 LPPQ93052 612 aa28.82■■■□□ 2.2
SURF1-203ENST00000463965 ADPGKQ9BRR6 497 aa28.82■■■□□ 2.2
SURF1-203ENST00000463965 C11orf84Q9BUA3 381 aaPredicted RBP28.82■■■□□ 2.2
SURF1-203ENST00000463965 PARVGQ9HBI0 331 aa28.82■■■□□ 2.2
SURF1-203ENST00000463965 RNF19AQ9NV58 838 aa28.82■■■□□ 2.2
SURF1-203ENST00000463965 CHD7Q9P2D1 2997 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 ITGA4P13612 1032 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 CACNB1Q02641 598 aaPredicted RBP28.81■■■□□ 2.2
SURF1-203ENST00000463965 GPM6BQ13491 265 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 GIT2Q14161 759 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 ADGRE1Q14246 886 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 LONRF3Q496Y0 759 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 AXDND1Q5T1B0 1012 aaPredicted RBP28.81■■■□□ 2.2
SURF1-203ENST00000463965 MYCT1Q8N699 235 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 GDPD5Q8WTR4 605 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 EIF2AQ9BY44 585 aaKnown RBP28.81■■■□□ 2.2
SURF1-203ENST00000463965 SCAND2PQ9GZW5 306 aaPredicted RBP28.81■■■□□ 2.2
SURF1-203ENST00000463965 ZHX3Q9H4I2 956 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 TYW1Q9NV66 732 aaKnown RBP28.81■■■□□ 2.2
SURF1-203ENST00000463965 ARHGAP28Q9P2N2 729 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 PCDHB12Q9Y5F1 795 aa28.81■■■□□ 2.2
SURF1-203ENST00000463965 C5orf67F2Z3F1 127 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 H3BNC9 293 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 SLC16A4O15374 487 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 STRN3Q13033 797 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 NAALADL2Q58DX5 795 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 SHC4Q6S5L8 630 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 IQUBQ8NA54 791 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 URGCPQ8TCY9 931 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 LEO1Q8WVC0 666 aaPredicted RBP28.8■■■□□ 2.2
SURF1-203ENST00000463965 LRRC27Q9C0I9 530 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 CUEDC2Q9H467 287 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 RSAD1Q9HA92 442 aa28.8■■■□□ 2.2
SURF1-203ENST00000463965 LMCD1Q9NZU5 365 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms