RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 BMP15O95972 392 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 RPN1P04843 607 aaKnown RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 CTSHP09668 335 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 HNRNPH3P31942 346 aaKnown RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 CDK8P49336 464 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 EPHB1P54762 984 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF844Q08AG5 666 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 SNX1Q13596 522 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 TNFAIP1Q13829 316 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 TRADDQ15628 312 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 ODF2Q5BJF6 829 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 ZC3H12AQ5D1E8 599 aaKnown RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 FIGNQ5HY92 759 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 RRP12Q5JTH9 1297 aaKnown RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 FAM83BQ5T0W9 1011 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 KLHDC7AQ5VTJ3 777 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 PLPP6Q8IY26 295 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 SPICE1Q8N0Z3 855 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 ADSSL1Q8N142 457 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 CRACR2BQ8N4Y2 399 aaPredicted RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF513Q8N8E2 541 aaPredicted RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 KIAA1958Q8N8K9 716 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 CCDC197Q8NCU1 140 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 TTC8Q8TAM2 541 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 AGAP11Q8TF27 550 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 KCNMB3Q9NPA1 279 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 PANK4Q9NVE7 773 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 PGAP2Q9UHJ9 254 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 SERPINB13Q9UIV8 391 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 HACL1Q9UJ83 578 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 GDAQ9Y2T3 454 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 RABGAP1Q9Y3P9 1069 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 PJA2O43164 708 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 DIAPH2O60879 1101 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 ASTN2O75129 1339 aaPredicted RBP9.4□□□□□ -0.9
SHQ1-203ENST00000463369 PRDM1O75626 825 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 PLEKP08567 350 aaPredicted RBP9.4□□□□□ -0.9
SHQ1-203ENST00000463369 LINGO3P0C6S8 592 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 KLK7P49862 253 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 PPARDQ03181 441 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 MCL1Q07820 350 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
SHQ1-203ENST00000463369 NID2Q14112 1375 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 PDCD2Q16342 344 aaPredicted RBP9.4□□□□□ -0.9
SHQ1-203ENST00000463369 ANKRD23Q86SG2 305 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 PNMA8AQ86V59 439 aaPredicted RBP9.4□□□□□ -0.9
SHQ1-203ENST00000463369 CENPTQ96BT3 561 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 KRT12Q99456 494 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 PYM1Q9BRP8 204 aaKnown RBP9.4□□□□□ -0.9
SHQ1-203ENST00000463369 TUBGCP2Q9BSJ2 902 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 YIPF3Q9GZM5 350 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 ISCUQ9H1K1 167 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
SHQ1-203ENST00000463369 PITPNM2Q9BZ72 1349 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 GRID2IPA4D2P6 1211 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 FAM205CA6NFA0 338 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 MYBP10242 640 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 CCND1P24385 295 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 CDC25CP30307 473 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 PMS1P54277 932 aaKnown RBP9.4□□□□□ -0.91
SHQ1-203ENST00000463369 DSC3Q14574 896 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 UAP1Q16222 522 aaPredicted RBP9.4□□□□□ -0.91
SHQ1-203ENST00000463369 SLC30A9Q6PML9 568 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 USP50Q70EL3 339 aaPredicted RBP9.4□□□□□ -0.91
SHQ1-203ENST00000463369 TBC1D1Q86TI0 1168 aaPredicted RBP9.4□□□□□ -0.91
SHQ1-203ENST00000463369 ZNF444Q8N0Y2 327 aaPredicted RBP9.4□□□□□ -0.91
SHQ1-203ENST00000463369 RNF10Q8N5U6 811 aaKnown RBP9.4□□□□□ -0.91
SHQ1-203ENST00000463369 ANKS4BQ8N8V4 417 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 SLC44A5Q8NCS7 719 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 OR2W6PQ8NHA6 318 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 NOC3LQ8WTT2 800 aaKnown RBP9.4□□□□□ -0.91
SHQ1-203ENST00000463369 LRRC45Q96CN5 670 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 CHMP6Q96FZ7 201 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 AGBL1Q96MI9 1066 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 TMEM39BQ9GZU3 492 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.91
SHQ1-203ENST00000463369 IRAK4Q9NWZ3 460 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 ARHGAP20Q9P2F6 1191 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 SALL4Q9UJQ4 1053 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 PLAGL2Q9UPG8 496 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 PCDHGC5Q9Y5F6 944 aa9.4□□□□□ -0.91
SHQ1-203ENST00000463369 DOCK1Q14185 1865 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 POTECB2RU33 542 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 ASAP2O43150 1006 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 RTN3O95197 1032 aaPredicted RBP9.39□□□□□ -0.91
SHQ1-203ENST00000463369 NEFHP12036 1026 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 SHMT1P34896 483 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 CTNNA1P35221 906 aaKnown RBP9.39□□□□□ -0.91
SHQ1-203ENST00000463369 KIF11P52732 1056 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 MTA1Q13330 715 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 ITIH4Q14624 930 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 RTN1Q16799 776 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 ERMARDQ5T6L9 678 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 ANGEL2Q5VTE6 544 aaKnown RBP9.39□□□□□ -0.91
SHQ1-203ENST00000463369 TYW1BQ6NUM6 668 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 APOBEC3FQ8IUX4 373 aaKnown RBP9.39□□□□□ -0.91
SHQ1-203ENST00000463369 CHCHD4Q8N4Q1 142 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 CSRNP1Q96S65 589 aa9.39□□□□□ -0.91
SHQ1-203ENST00000463369 PHIPQ8WWQ0 1821 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 IQCA1LA6NCM1 817 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms